Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04072 ATGGCTTCTTATAACATGCCTTCATCAACTTCCTCCCTAACGTTTAAAGTGTGGAGGTGCCAACCGGAGCTGGTGGCTCCTGCTTCACCCACTCCTCGCGAAGTTAAACTACTATCCGACATAGATGATCAAGAAGGCTTTCGTTTCCAAGTTCCAATCATACAGATATATAGTCACGAACCATCAATGGCAGAGAAAGACCCTGTAGAAGTGATTAGACGGGCCCTGGCACAAACACTTGTGTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGGGACCTGGGCGCAAATTGATGGTGGATTGTAGTGGGGAGGGAGTCATGTTCATTGAGGCTGATGCAGACGTGACACTTGATCAATTTGGTGACACTCTTCAACCTCCATTCCCATGCTTCCAAGAACTCCTATATGATGTCCCAGGCACAGAACACGTTATCAACTGTCCCCTTCTACTCATTCAGGTCACACGACTTAGGTGCGGTGGTTTCATCGTGGCCACCCGCGTGAACCACACCATGAGTGACGGAGCTGGTATGAAACAATTCATGAACGCCTGGGCAGAAATGGCTCGTGGTGCACGCCAACCTTCAATTCCACCTGTGTGGCATAGGGAGCTCCTAATGGCAAGAAATCCACCACGCATCACATGCAACCATCAAGAATATGTGCAAATACAAGATACCACCAAGGAAGACACCATCATGCTTGAACAATCTTTTTTCTTTGGACCCATCGAGATAGCTGCCCTTCGTCGCTTGGTTCCCTTTCACCTTCGAGAATGCACCACATTTGATATTATCACCGCATGCCTATGGTGTTGCCGCACAAAAGCATTGCAGCTAGAGTCTGAGGATGAGGTTCGCATGATGTGCATTGTCAACACACGTTCCAGGTTTAACCCTCCGTTACCTGTCGGTTACTACGGCAACGCTTTTGCGTATCCGGCTGCGATCACCACTGCAGGGAAGCTTTGCGGAAACCCTTTTGGCTATGCCGTGGAGTTGATTAGGAAAGCGAAAGCTGAGGTCACAGAGGAGTATATGCATTCTGTGGCAGATCTTATGGTAACCAAGGGACGGTGTTTATTCACAACGGTAAGGTCTTGCATTGTGTCTGATTTGACACGTGCTAAGTTCAGAGAAGTGAATTTTGGGTGGGGCGAGGCAGTGTATGGTGGAGTGGCCAAAGGTGGGGCCGGGTCCTTTTCGAGCGTAACCTTTTTGGTACCGTGTAAGAATGCAAAGGGAGAAGAAGGTATAGTATTCCCAATTCGCTTGCCCCCGGAAGCAATGAAGAGGTTTGCGAAAGAGTTGGATGGCATGATTCGGAACCAAAACCAATCTTCAAGGAGTGTTCCCCGTTTAATCACATCTACCTTATAG 1383 0.4845 MASYNMPSSTSSLTFKVWRCQPELVAPASPTPREVKLLSDIDDQEGFRFQVPIIQIYSHEPSMAEKDPVEVIRRALAQTLVFYYPFAGRLREGPGRKLMVDCSGEGVMFIEADADVTLDQFGDTLQPPFPCFQELLYDVPGTEHVINCPLLLIQVTRLRCGGFIVATRVNHTMSDGAGMKQFMNAWAEMARGARQPSIPPVWHRELLMARNPPRITCNHQEYVQIQDTTKEDTIMLEQSFFFGPIEIAALRRLVPFHLRECTTFDIITACLWCCRTKALQLESEDEVRMMCIVNTRSRFNPPLPVGYYGNAFAYPAAITTAGKLCGNPFGYAVELIRKAKAEVTEEYMHSVADLMVTKGRCLFTTVRSCIVSDLTRAKFREVNFGWGEAVYGGVAKGGAGSFSSVTFLVPCKNAKGEEGIVFPIRLPPEAMKRFAKELDGMIRNQNQSSRSVPRLITSTL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04072 460 Gene3D - 15 219 IPR023213 -
Rops8g04072 460 Pfam Transferase family 20 438 - -
Rops8g04072 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 438 - -
Rops8g04072 460 Gene3D - 220 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04072 Rops-Chr8 82535870 82537713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04072 24 438 Monolignol Biosynthesis Gene Families AT5G48930 29.841 4.33e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04072 K19861 - gmx:100792864 698.738