Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04071 ATGGCTTTATCACCTTCCTCCCTAACGTTTAAAGTGCGAAGGAGCCCACCGGAGCTGGTGGCTCCTGCTTCACCCACTCCTTGCGAAGTTAAACTACTATCTGACATAGATGATCAAGAAGGCTTTCGTTTCCAAATTCCAGTCATACAGATATATCGTCATGAACCATCAATGGCACAGAAAGACCCTGTTGAAGTGATTAGAAAGGCACTGGCACAAACACTTGTGTTCTACTACCCATATGCGGGAAGGCTTAGGGAGGGGCCTGGCCGCAAATTGATGGTGGATTGTACCGGAGAGGGAGTCATGTTCATTGAGGCTGATGCAGACGTGACACTTGATCAATTTGGTGACACTCTTCAGCCTCCATTCCCATGCTTCCAAGAACTCCTATATGATGTTCCAGGCTCAGAACAAGTTATCAACTGTCCCCTTCTACTCATTCAGGTCACACGGCTTAAGTGTGCTGGTTTCATCGTGGCCATCCGCTTGAACCACACCATGAGTGACGGAGCTGGTTTGAAACAATTCATGAACGCCTGGGCAGAAATGGCTCGTGGTGCACATCAACCTTCCATTCCACCTGTGTGGCATAGGGAGCTCCTAATGGCAAGAAATCCACCATGCATCACATGCAACCATCAAGAATATGTGCAAATACCAGATACCACCAAGGAAGACACCATCATGCTTGAACAATCGTTTTTCTTTGGACCCACCGAGATAGCTGCTCTTCGTCGCTTGGTTCCTTTTCACCTTCGAGAATGCACCACATTTGATATTATCACTGCATGCTTATGGTGCTGCCGCACAAAAGCATTGCAGCTAGAGTTTGAGGATGAGGTTCGCATGATGTGCATTGTCAACGCACGTTCCAAGTTTAACCCTCCGTTGCCTGTCGGTTACTACGGCAACACTTTGCATATCCGGCTGCGGTCACCACTGCAGGGAAGCTTTGCGGAAATCCTTTTGGCTATGTTGTGGAGTTGA 990 0.4808 MALSPSSLTFKVRRSPPELVAPASPTPCEVKLLSDIDDQEGFRFQIPVIQIYRHEPSMAQKDPVEVIRKALAQTLVFYYPYAGRLREGPGRKLMVDCTGEGVMFIEADADVTLDQFGDTLQPPFPCFQELLYDVPGSEQVINCPLLLIQVTRLKCAGFIVAIRLNHTMSDGAGLKQFMNAWAEMARGAHQPSIPPVWHRELLMARNPPCITCNHQEYVQIPDTTKEDTIMLEQSFFFGPTEIAALRRLVPFHLRECTTFDIITACLWCCRTKALQLEFEDEVRMMCIVNARSKFNPPLPVGYYGNTLHIRLRSPLQGSFAEILLAMLWS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04071 329 Gene3D - 216 321 IPR023213 -
Rops8g04071 329 Gene3D - 10 215 IPR023213 -
Rops8g04071 329 FunFam Spermidine hydroxycinnamoyl transferase 10 217 - -
Rops8g04071 329 Pfam Transferase family 16 307 - -
Rops8g04071 329 PANTHER ACYL TRANSFERASE 4 10 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04071 Rops-Chr8 82467394 82468813 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04071 11 307 Monolignol Biosynthesis Gene Families AT5G48930 31.373 4.62e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04071 K19861 - gmx:100792864 476.863