Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04068 ATGGCTTTATCACCTTCCTCCCTAACGTTTAAAGTGCGAAGGAGCCCACCGGAGCTGGTGGCTCCTGCTTCACCCACTCCTTGCGAAGTTAAACTACTATCTGACATAGATGATCAAGAAGGCTTTCGTTTCCAAATTCCAGTCATACAGATATATCGTCATGAACCATCAATGGCACAGAAAGACCCTGTTGAAGTGATTAGAAAGGCACTGGCACAAACACTTGTGTTCTACTACCCATATGCGGGAAGGCTTAGGGAGGGGCCTGGCCGCAAATTGATGGTGGATTGTACCGGAGAGGGAGTCATGTTCATTGAGGCTGATGCAGACGTGACACTTGATCAATTTGGTGACACTCTTCAGCCTCCATTCCCATGCTTCCAAGAACTCCCATATGATGTTCCAGGCTCAGAACAAGTTATCAACTGTCCCCTTCTACTCATTCAGGTCACACGGCTTAAGTGTGCTGGTTTCATCGTGGCCATCCGCTTGAACCACACCATGAGTGACGGAGCTGGTTTGAAACAATTCATGAACGCCTGGGCAGAAATGGCTCGTGGTGCACATCAACCTTCCATTCCACCTGTGTGGCATAGGGAGCTCCTAATGGCAAGAAATCCACCATGCATCACATGCAACCATCAAGAATATGTGCAAATACCAGATACCACCAAGGAAGACACCATCATGCTTGAACAATCGTTTTTCTTTGGACCCACCGAGATAGCTGCTCTTCGTCGCTTGGTTCCTTTTCACCTTCGAGAATGCACCACATTTGATATTATCACTGCATGCTTATGGTGCTGCCGCACAAAAGCATTGCAGCTAGAGTTTGAGGATGAGGTTCGCATGATGTGCATTGTCAACGCACGTTCCAAGTTTAACCCTCCGTTGCCTGTCGGTTACTACGGCAACACTTTTGCATATCCGGCTGCGGTCACCACTGCAGGGAAGCTTTGCGGAAATCCTTTTGGCTATGTTGTGGAGTTGATTAGGAAAGTGAAAGCTGAGGTCACAGAGGAGTATATGCATTCTGTGGCAGATCTTATGGTAACCAAGGGACGGTGTTTATTCACAACCGTAAGGTCTTGCATTGTGTCTGATTTGACACGTGCTAAGTTCAGAGAAGTGAATTTTGGGTGGGGCGAGGCAGTGTATGGTGGAGTGGCCAAAGGTGGGGCCGGGTCCTTTTCGAGCGCAACCTTTTTGGTACCATGTAAGAATGTAAAGGGAGAAGAAGGTATAGTATTTCCAATTCGCTTGCCCCTGGAAGCAATGAAGAGGTTTGCAAAAGAATTGGATGGCATGATTCGGAACCAAAACCAACCTTCAAGGAGTGTTCCCCGTTTAATCACATCTACCTTATAG 1368 0.4744 MALSPSSLTFKVRRSPPELVAPASPTPCEVKLLSDIDDQEGFRFQIPVIQIYRHEPSMAQKDPVEVIRKALAQTLVFYYPYAGRLREGPGRKLMVDCTGEGVMFIEADADVTLDQFGDTLQPPFPCFQELPYDVPGSEQVINCPLLLIQVTRLKCAGFIVAIRLNHTMSDGAGLKQFMNAWAEMARGAHQPSIPPVWHRELLMARNPPCITCNHQEYVQIPDTTKEDTIMLEQSFFFGPTEIAALRRLVPFHLRECTTFDIITACLWCCRTKALQLEFEDEVRMMCIVNARSKFNPPLPVGYYGNTFAYPAAVTTAGKLCGNPFGYVVELIRKVKAEVTEEYMHSVADLMVTKGRCLFTTVRSCIVSDLTRAKFREVNFGWGEAVYGGVAKGGAGSFSSATFLVPCKNVKGEEGIVFPIRLPLEAMKRFAKELDGMIRNQNQPSRSVPRLITSTL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04068 455 Gene3D - 10 215 IPR023213 -
Rops8g04068 455 PANTHER ACYL TRANSFERASE 4 10 436 - -
Rops8g04068 455 Pfam Transferase family 16 433 - -
Rops8g04068 455 Gene3D - 216 433 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04068 Rops-Chr8 82397997 82399794 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04068 19 433 Monolignol Biosynthesis Gene Families AT5G48930 29.167 3.62e-48 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04068 K19861 - gmx:100792864 671.774