Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04066 ATGGCTTCTTATAACATGCCTTCATCAACTTCCTCCCTAACGTTTCTAGTGTGGAGGTGCCAACCGGAGCTGGTGGCTCCTGCTTCACCCACTCCTCGCGAAGTTAAACTACTATCCGACATAGATGATCAAGAAGGCTTTCGTTTCCAAGTTCCAATCATACAGATGTATAGTCACGAACCATCAATGGCAGAGAAAGACCCTGTAGAAGTGATTAGACGGGCACTGGCACAAACGCTTGTGTTCTACTACCCATATGCGGGTAAGCTTATGGAGGGGCCTGGCCGCAAATTGATGGTGGATTGTACAGGGGAGGGAGTTATCTTCATTGAGGCTGATGAAGATTTAACACTTGATCAATTTGGTGACACTCTTCAACCTCCATTCCCATGCTTCCAAGAACTCCTGTACGATGTTCCAGGCTCAGAACAAATTATCAACTCTCCCCTTCTACTCATACAGGTCACACGCCTTAAGTGTGGTGGTTTCATAGTGGTCATCCGCTTTAATCACGCCATGAGCGATGCAGCTGGGAAGCTTTGCGGAAACCCTTTTGGCTATGCCTTGGAGTTGATTAGGAAAGCAAAAGCTGAGGTCACGGAGGAGTATATGCATTCTGTGGCAGATCTTATGGTGGTTAAGGGACGATGTTTATTCACAACAGTAAGGTCTTGTATTGTGTTAGATTTGACACGTGCCAGAGTTAGAGAAGTGAATTTTGGGTGGGGTGACACAGTGTATGGTGGAGTGGCCAAAGGTGGGGCCGGGCCCTTCCCTAGAGCAACCTTTCTCACACCGTGTGAGAATGCAAAGGGAGAAGAAGGTATCCTATTACCAATTTGCTTGCCTGCCGAAACTATGAACAAGTTTGCGAAAGAGTTGGATGACATGATTCGGAACCAAAATCAACCTTCAACAAGTGTTCGCAGTTTTATCAAGTCTACCTTATAG 951 0.4637 MASYNMPSSTSSLTFLVWRCQPELVAPASPTPREVKLLSDIDDQEGFRFQVPIIQMYSHEPSMAEKDPVEVIRRALAQTLVFYYPYAGKLMEGPGRKLMVDCTGEGVIFIEADEDLTLDQFGDTLQPPFPCFQELLYDVPGSEQIINSPLLLIQVTRLKCGGFIVVIRFNHAMSDAAGKLCGNPFGYALELIRKAKAEVTEEYMHSVADLMVVKGRCLFTTVRSCIVLDLTRARVREVNFGWGDTVYGGVAKGGAGPFPRATFLTPCENAKGEEGILLPICLPAETMNKFAKELDDMIRNQNQPSTSVRSFIKSTL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04066 316 PANTHER ACYL TRANSFERASE 4 187 298 - -
Rops8g04066 316 Gene3D - 17 180 IPR023213 -
Rops8g04066 316 Pfam Transferase family 22 178 - -
Rops8g04066 316 Pfam Transferase family 180 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04066 Rops-Chr8 82356045 82364208 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04066 24 180 Monolignol Biosynthesis Gene Families AT5G48930 33.758 3.77e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04066 K19861 - gmx:100797017 271.937