Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04064 ATGGCTTCACCATCTCTAAAGTTTGAAGCGCGGAGGTGTCGACCGGAGCTTGTGGCTCCCGCTGCACCCACTCCTCACGAAGTTAAACTACTATCCGACATAGATGATCAAGAAGGCTTACGCTTCCATATTCCAATCGTACTAATGTATCGTCATGAATCATCCATGGCAGAGAAAGACCCTGTCAAAGTGATTAGACGGGCACTGGCACAAACACTTGTGTTCTACTATCCATATGCGGGTAGGCTAAGGGAGGGGCCTGGCCGCAAATTGATGGTGGATTGTACTGGGGAGGGCGTCATGTTCATTGAGGCTGATGTAGATGTGACTCTTAATCAATTTGGTGACATTCTTCAACCTCCATTCCCATGCTTCCAAGAACTCCTATACGATGTTCCAGGTTCAGAACAAGTTATCAACTGTCCCCTTCTACTCATACAGGTCACACGGTTAAAGTGCGGTGGTTTTATTGTGGCCATTAGTTGTAACCACACTATGAGTGACGGAGCTGGTATGAAACAATTCTTGAACGCCTGGGCAGAAATGGCTCGTGGTGCATGCCAACCTTCCATTCCACCTGTGTGGCGTAGGGAGCTCCTAATGGCAAGAGATCCACCACGCATCACATGCAATCATCGCGAATACGAGCAAGTGCCAGACACCACCAACGAAGGAACTGTCATGCTTGATCGATCTTTCTTCTTTGGACCCACTGAGATTGCTGCTCTTCGTCGCTTGGTTCCCCCTCACTTTCACAAATGCACCACGTTCGATGTTATCACCGCATGCTTATGGTGCTGTCGCACAAAAGCTTTGCAGTTAAAGCCAGAGGAGGAGGTTCGCATGATGTGCATCGTCAATGCACGTTCCAGGTTCAACCTTCCGTTACCTGTCGGTTATTACGGCAATGCTTTTGTGTACCCGGCGGCGGTCACCACTGCGGGGAAACTTTGCGGAAACCCTTTCGGCTATGCCGTGGAGTTGATAAGGAAGGTGAAAGCTGAGGCCACGGAGGAGTATATGCAATCTGTGGCAGATCTTATGGTGATCAAGGAACGATGTTTATTTACAACCGTAAGGTCTTGTATTGTGTCAGATTTGACACGTGCTAAGTTCAGAGAAGTGAATTTTGGGTGGGGGGACGCTGTGTATGGTGGAGTTGCCCAAGGTGGGGCTGGGCCCTTTCCTGGAGCAACCTATCTCATACCAAATAAGAATGCAAAGGGAGAGGAAGGTATAACGTTCCCAATTCGCTTGCCTGCGCAAGCTATGAAGAGGTTTACGAAGGAGTTGGATGACATGATTGGAAAACCAAAAGGAGGGTTGCTGGTTTTAGAATCCTAA 1344 0.4859 MASPSLKFEARRCRPELVAPAAPTPHEVKLLSDIDDQEGLRFHIPIVLMYRHESSMAEKDPVKVIRRALAQTLVFYYPYAGRLREGPGRKLMVDCTGEGVMFIEADVDVTLNQFGDILQPPFPCFQELLYDVPGSEQVINCPLLLIQVTRLKCGGFIVAISCNHTMSDGAGMKQFLNAWAEMARGACQPSIPPVWRRELLMARDPPRITCNHREYEQVPDTTNEGTVMLDRSFFFGPTEIAALRRLVPPHFHKCTTFDVITACLWCCRTKALQLKPEEEVRMMCIVNARSRFNLPLPVGYYGNAFVYPAAVTTAGKLCGNPFGYAVELIRKVKAEATEEYMQSVADLMVIKERCLFTTVRSCIVSDLTRAKFREVNFGWGDAVYGGVAQGGAGPFPGATYLIPNKNAKGEEGITFPIRLPAQAMKRFTKELDDMIGKPKGGLLVLES* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04064 447 Pfam Transferase family 16 433 - -
Rops8g04064 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 432 - -
Rops8g04064 447 Gene3D - 214 431 IPR023213 -
Rops8g04064 447 Gene3D - 11 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04064 Rops-Chr8 82297667 82299508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04064 17 431 Monolignol Biosynthesis Gene Families AT5G48930 29.630 6.43e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04064 K19861 - gmx:100792864 661.759