Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04063 ATGGCCTCATTACCTCCCTCTCTAACGTTTCAAATGCGGAGATGCCAACCAGAGCTGGTGGCTCCTGCTTCACCCACTCCTCACGAAGTCAAACTACTATCCGACATAGATGATCAAGAAGGCTTACGTTTCCGAATTCCAATCGTACTGATATATCGTCACACACCATCAATGGCAGAGACAGACCCTGTGGAAGTGATTAGACAGGCACTGGCACAAACACTTGTGTTCTACTACCCATATGCGGGTAGGCTTAGGGAGGGGCCTGGCCGCAAATTGATGGTGGATTGTACTGGAGAGGGAGTCATGTTCATTGAGGCTGATGCTGACATAACACTTGATCAATTCGGTGACGCTCTTCAACCCCCTTTCCCTTGTTTCCAAGAACTACTACACGATGTTCTTGGCTCAGAACAAGTTATAAACTGCCCCCTTCTAGTCATACAGGTCACACGCCTTAAGTGTGGTGGTTTGATCTTGGCCATCGGCTGGAACCACAGCATGAGCGACGCAGCTGGTATGAAACAATTCTTGAAAACCTGGACAGAGATGGCTCGTGGTGCTCGCCAGCCTTCCATTCCACCTTTGTGGTGTAGGGAACTCCTAATGGCAAGGGATCCACCGCGCATCACATGCAACCATCACGAATACGATCAAGTGCCAGATACCACAAAGGAAGGAACCATCATGGTTGGTCAATCTTTCTTTTTTGGATCCACCGAGATTGCTGCCCTTCGTCGCTTGGTTCCCTCTCACCTTTCCCAATGCACTACCTTTGATATTATCACTGCTTGCTTATGGTGTTGCCGCACAAAAGCATTGCAACTAGAGCCAGACGAGGAGGTTCACATGATGTGCATCGTCAATGCACGTTCCAGGTTTAACCCTCCGTTACCTGTCGGTTATTATGGCAACGTTTTTGCGTTGCCGGCGGCAGTCACCACTGCAGGGAAGCTTTGCGGAAACCCTTTTGGCTATGCGGTGGAGTTGGTAAGGAAAGCGAAAGGTGAGGTCACAGAGGAGTATATGCATTCTGTGGCTGATTTTATGGTGATAAAGGGACGATGTTTATGGACAACCGTAAGGTCTATTATCGTGTCAGATTTGACACGTGCTAGGTTCAGAGAAGTGAATTTTGGGTGGGGTGAGGCAGTGTATGGTGGAGTGGCCGGACCCTTGCCTTTTGCAACCTTTCTCATACCGTGTAAGAATACAGCGGGAGAAGAAGGCATACTTTTACCAATGTGCTTGCCCGCTCAAGTTATGAAGAGGTTCGTGACAGAGTTGGATGACATGATTCGGAACCAAAAATAA 1314 0.4855 MASLPPSLTFQMRRCQPELVAPASPTPHEVKLLSDIDDQEGLRFRIPIVLIYRHTPSMAETDPVEVIRQALAQTLVFYYPYAGRLREGPGRKLMVDCTGEGVMFIEADADITLDQFGDALQPPFPCFQELLHDVLGSEQVINCPLLVIQVTRLKCGGLILAIGWNHSMSDAAGMKQFLKTWTEMARGARQPSIPPLWCRELLMARDPPRITCNHHEYDQVPDTTKEGTIMVGQSFFFGSTEIAALRRLVPSHLSQCTTFDIITACLWCCRTKALQLEPDEEVHMMCIVNARSRFNPPLPVGYYGNVFALPAAVTTAGKLCGNPFGYAVELVRKAKGEVTEEYMHSVADFMVIKGRCLWTTVRSIIVSDLTRARFREVNFGWGEAVYGGVAGPLPFATFLIPCKNTAGEEGILLPMCLPAQVMKRFVTELDDMIRNQK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04063 437 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 425 - -
Rops8g04063 437 Gene3D - 12 215 IPR023213 -
Rops8g04063 437 Pfam Transferase family 17 431 - -
Rops8g04063 437 Gene3D - 216 427 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04063 Rops-Chr8 82274082 82275541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04063 19 425 Monolignol Biosynthesis Gene Families AT5G48930 30.824 1.63e-55 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04063 K19861 - gmx:100792864 649.818