Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04062 ATGGCAATCAACTTGTCAAGAATCACCCTGCGGCCATTTAAGTTGACCGACGTGGATGATTTCATGTTAGTGGCAGGTGATGATAGAGTGACTTGCTATACACGGTGGAACACTTTTGTTTCCAGGGAACAAGCTTTGACTTTCATCCGAGATGTGTGCATACCTCATCCATGGAGTCGATCCATATGCATTGATGATCGAACTATTGGATTTATATCTTTCTCTATTGGATCTGGTGATGGCAGGTGTAGAGCAGAAATAGGCTATGCTATAGCTGCCAAGTACTGGGGCCAAGGGATATGCACCAAAGCAGTGAAGATTGCTGTGTTACAAGTGTTCAAGGACTTCCCTGATTTGATAAGGATACAAGCTTTTGTTGCTGTAGAGAACAAAGCTTCCCAGAGGGTCTTGGAGAAGGCAGGATTCCTTAGGGAGGGGATTCTGAGAAAGTATGCCTATGTTAAGGGGATAGTTAAGGATGTTGCTATATTTAGCATTTTGCCAGAGGAATCTCATCCTCTAGAGTAA 528 0.4356 MAINLSRITLRPFKLTDVDDFMLVAGDDRVTCYTRWNTFVSREQALTFIRDVCIPHPWSRSICIDDRTIGFISFSIGSGDGRCRAEIGYAIAAKYWGQGICTKAVKIAVLQVFKDFPDLIRIQAFVAVENKASQRVLEKAGFLREGILRKYAYVKGIVKDVAIFSILPEESHPLE* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04062 175 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 170 IPR000182 GO:0016747
Rops8g04062 175 Pfam Acetyltransferase (GNAT) domain 7 142 IPR000182 GO:0016747
Rops8g04062 175 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 6 167 IPR016181 -
Rops8g04062 175 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 169 - -
Rops8g04062 175 Gene3D - 2 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04062 Rops-Chr8 82248978 82249505 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g04062 Acetyltransf_3 4e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04062 - - gmx:100776526 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04062 8 82248978 82249505 Rops8g04062 8 82248978 82249505 ECH