Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04061 ATGGCAATGGTGTTGTCTAAGGTAAGTCTCCGGCCATTCAAGTTGAGCGATGTTGATGATTTCTTGTTATGGGCAGGGGATGATCAAGTCACTGGAAACATTCGATGGAAGACTTGTTGTTCGAGGGAAGAGGCTTTGGATTTCATTAGAGATGTTTGCATACCTCATCCTTGGCGTAGGTCAATCTGCCTTGATGATCGTTCCATTGGCTTTGTTTCAGTTTATCCCTGGTCAGGTGATGACAGGTGCAAGGCTGACATAGGCTATGCGATTGCGGCCAACTATTGGGGTCAAGGGATAACAACCAAAGCACTCAAGATTGCTTTGCCTCAAGTCTTCAAGGACCTCCCTGATTTGCTAAGGTTGCAGGCATTTGCTGATGTGGAAAACAAGGCTTCTCAGAGGGTCTTGGAAAAGGCTGGGTTCCTCAGGGAGGGAGTCCTTAGAAAGTACACTTACATCAAGGGCAATCTCATGGATTTGGTTGTATATAGCTTTTTATCTACAGATGAAATTCCTCCTGGGGACTAG 531 0.4576 MAMVLSKVSLRPFKLSDVDDFLLWAGDDQVTGNIRWKTCCSREEALDFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAIAANYWGQGITTKALKIALPQVFKDLPDLLRLQAFADVENKASQRVLEKAGFLREGVLRKYTYIKGNLMDLVVYSFLSTDEIPPGD* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04061 176 Gene3D - 2 167 - -
Rops8g04061 176 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 8 164 IPR000182 GO:0016747
Rops8g04061 176 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 171 - -
Rops8g04061 176 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 7 167 IPR016181 -
Rops8g04061 176 Pfam Acetyltransferase (GNAT) domain 9 142 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04061 Rops-Chr8 82247455 82247985 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops8g04061 Acetyltransf_3 1.8e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04061 - - gmx:100527210 304.679