Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04056 ATGCTGAATCTCATCGAGAGTGGAAGCGGTGGAACAGTGTACAAGGTGGTCCACAGAGCCATCGGTCGTGTCTACACACTTAAGGTGATCTACAGACATCACAAGGAGTTGGTGCGGCGACAGATCCACCGAGAAATCCATATCCTGAGGGGCGTCGACGATCGCAACGTGGTCAAGTGCCATGACATGTACGATCACAACTTAGAAATCCAGGTCCTGCTCGAGTTTATGGATGATGGTTCCTTCAAAGGGAAACACATCCCTCAGGAGCAGTAG 276 0.5072 MLNLIESGSGGTVYKVVHRAIGRVYTLKVIYRHHKELVRRQIHREIHILRGVDDRNVVKCHDMYDHNLEIQVLLEFMDDGSFKGKHIPQEQ* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04056 91 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 3 83 - -
Rops8g04056 91 ProSiteProfiles Protein kinase domain profile. 1 91 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04056 91 Pfam Protein kinase domain 6 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g04056 91 SUPERFAMILY Protein kinase-like (PK-like) 2 83 IPR011009 -
Rops8g04056 91 Gene3D Phosphorylase Kinase; domain 1 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04056 Rops-Chr8 82147182 82147457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04056 2 91 MAP Kinase Kinase Gene Family AT3G21220 67.778 2.06e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Rops8g04056 Pkinase 2.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04056 K13413 - gmx:100786390 146.747