Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04049 ATGGCTGTTGGATTAAGTAACGTACTTTCAGAACTGCAAATGGTATCCACTTCAGATTATGCCTCAGTAATCTCCTTGAGCCTATTTGTGGCTCTGCTATGTGCTTGTATTGTCATTGGTCATCTTCTTGAGGAGAATCGGTGGGTCAATGAGTCTATCACTGCCCTTTTGATAGGTCTTTGCACTGGCGTAGTCATTTTGTTGGTTAGCCGTGGTAGAAGCTCCCATCTTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAATGCCGGGTTTCAGGTGAAAAAGAAGCGGTTTTTTGTTAACTTCATCACCATCATGCTGTTTGGTGCTGTTGGCACGTTAATAAGTTGTAGCATCATATCCTTCGGTGTCTCGCAGATTTTTAAGAGGATAGGTATTGGTTCACTGGATATAGGGGATTATCTAGCAATTGGTGCAATGTTTGCTGCCACAGATTCTGTGTGCACGTTGCAGGTGCTAAACCAGGATGAGACACCTTTACTATACAGTCTTGTGTTTGGCGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCAAAAGTTTTGACCTTGACCAAATTGACCCCAGAATTGCTTTGCATTTTTTTGGCAACTTCTTATATCTGTTTGTAGCAAGCACCGTGCTAGGGGTTTTGGCTGGTCTACTTACTGCTTATATTATTAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTTATGATGCTAATGGCCTACCTTTCCTACATTCTGGCTGAATTATGGTATCTGAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTTATGTCTCATTATACATGGCATAATGTGACTGAGAGTTCAAGAATCACTACCAAACATGCTTTTGCAACCTTGTCATTTGTAGCTGAGACTTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAAATTTGCTAGTGATAGACCTGGAACATCTCTTGTTGTGAGTTCAGTATTGTTGGGTCTAGTGCTTGCTGGAAGAGCAGCATTTGTTTTCCCCTTATCCTTCTTATCCAACCTGGCTAAAAAATCGTCAAATGAGAAAATAAGCATCAGGCAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATATGTTCACCATGTCGGGGCATACTGAACTGCGAACCAATGCCATCATGATCACTAGCACCATCACTGTTGTGCTTGTCAGCACAGTGGTGTTTGGTCTGATGACTAAGCCACTAATAAGGTACTTGCTGCCTTTTGGTCCCCAAACTCCTCCTAAAAGCAAATCAACTTCACCAAAATCAATCACAGTGCCATTTCTTGGAAGTCCCCAAGATCCCGAAGCCGATCTTGATGGCAATGAAATTCATCCTCCAAGCAGCATTCGTGACTTGCTAACAACTCCAACACACACTGTTCATCGCTTATGGCGTAAGTTTGATGATACAATGATGCGTCCAGTTTTTGGAGGCAGGGGTTTTGTTCCTGTAGAACCTAGCTCACCAACTGAACGCAACAGGCATTAA 1611 0.4233 MAVGLSNVLSELQMVSTSDYASVISLSLFVALLCACIVIGHLLEENRWVNESITALLIGLCTGVVILLVSRGRSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKRFFVNFITIMLFGAVGTLISCSIISFGVSQIFKRIGIGSLDIGDYLAIGAMFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLDQIDPRIALHFFGNFLYLFVASTVLGVLAGLLTAYIIKKLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAETFIFLYVGMDALDIEKWKFASDRPGTSLVVSSVLLGLVLAGRAAFVFPLSFLSNLAKKSSNEKISIRQQVIIWWAGLMRGAVSMALAYNMFTMSGHTELRTNAIMITSTITVVLVSTVVFGLMTKPLIRYLLPFGPQTPPKSKSTSPKSITVPFLGSPQDPEADLDGNEIHPPSSIRDLLTTPTHTVHRLWRKFDDTMMRPVFGGRGFVPVEPSSPTERNRH* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04049 536 Gene3D - 146 197 - -
Rops8g04049 536 PANTHER SODIUM/HYDROGEN EXCHANGER 16 517 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Rops8g04049 536 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops8g04049 536 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops8g04049 536 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops8g04049 536 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops8g04049 536 MobiDBLite consensus disorder prediction 452 467 - -
Rops8g04049 536 Pfam Sodium/hydrogen exchanger family 28 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Rops8g04049 536 NCBIfam sodium/hydrogen exchanger 3 25 445 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Rops8g04049 536 MobiDBLite consensus disorder prediction 452 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04049 Rops-Chr8 82049234 82055115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04049 6 536 Antiporters AT3G05030 74.860 0.0 820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04049 - - gmx:100787925 860.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04049 8 82049234 82055115 Rops8g04049 8 82049234 82055115 ECH
Rops8g04049 8 82049234 82055115 Rops6g01797 6 35703276 35709636 PCT