Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04038 ATGGAGTGCAACAAGGATGAAGCTCTGAGGGCAAAGCAAATTGCTGAAAATAGAATGCAAAGTGGTGACTTTGTAGGGGCACTGAAGTTTGCTTTGAAAGCCAAAACTCTGTTTCCTGAGATTCAGAACATTACTCAGATCCTCACTGTTTGTGAGGTTCACTGTGCTGCACAGAACAAACTCTCTGGGTCTGACATGGACTGGTATAGAATTCTTCAGACTGAACAATTTGCCGATGAAGTAACTATAAAGAAACAGTACAGGAAGCTTGCACTGCTACTTCATCCTGATAAAAATAGATCTGCCGGGGCAGAGGCTGCTTTCAAGCTGATTGGGGAAGCTAACAGATTTTTGAGTGACCCAATAAAGCGTTCTTCATATGACTTTAGGATTAGAGGCCCTGTGGGAACTACAGCACCTAAGGTTCAATCCTATCACTCAAATAGGAGTTCTTTTGGGGTGAAAGGTGATGGGAATGCAAGAAATTATCAGAATATTTTTCATCCGGATGCCCATACCTGGAATTCCCATCAGCGGGATGAACAGCAGACATTTTGGACATCTTGCCCGAATTGTAATACTAGGTACCAGTACTACAAAACCATTTTAAATGCTACCTTACGTTGTCAACAGTGTTCTAAGACCTTTACAGCTCGTGATATGGGGTACCAGGGTGCATCAACAAGTCATACTTGGTCATCATTTATTAACCGTAAAGAGCCTCCAAAGCATGTGCCACCAAAAGAAGCATCAAAAAGTAATGGTGGAAAAACTTGTGGTAGAGGAATGGAGGATAAGTTTGTGCGATCTAGTCCTGCATCTATGACAAAATGTACAGCTGGAATTGGTGTCCATCATGAAGTTGAAAAGGGTAAAGATGGCCACGTGGCTGCAGGAGTGACAAAGGCTGGTGTTGGAACTTCCAACCCTGCTACATCCAAAGCCAAGGAATCACAAACCTCTACAAATGTTGGAAGTAAGAGAGCAAGGCAGTCAGCATCAGATTTGAGAGATAATAACAAGGCTGGAAATGGTAGTGGCATGAAAGATACCAATGTTCGAGAAAATGGTGTTGATCTTTCTGGACTTAATTCAGGAGTCCACCCTAGGAGATCTTCCAGGAAAAAGCAGGATGTTTCATACACAGAAACTGCTGAAGTTGGTGATTTTGAGAGTTCTTCCAAAAGACCACGACAACATGAATCATTTAACACCATTGAATTGGAGAAGAGAGAAGTGCCTTCAAGTGGTGGGTTGTTCAATAACAATAGTGCAGCTAGTTCCACTGCTGGTGTGGCTGGTCAGAATGGAGCGACGAGAAATAAAGCAAGTGCCCCACCTGAAGAAACAGTTTTAAGGAATAAAACGGAAATTGAGCAGTCAAATGTGCAAAGAAAGGAGGCATCCAAGTCAGATTGCCCACCTAGTTTAGAGATTTGCTGTCCCGATCCAGATTTCAGTGATTTTGAGAAGGATAAGGCAGAGGATTGTTTTGCTGCTGATCAATTCTGGGCTATCTTTGATAATACTGATAGTATGCCAAGATTCTATGCTCTCATCAAGAAAGTGTACTCCCCTTTCAAGTTGCTGATTACTTGGCTGGAGGCTGACTCAAATGACCAAGGGGAGATTGATTGGCATGATGCAGGTTTGCCTGTTGCCTGTGGTAAGTTCAAACTTGGTTGTTCTCAGAGAACTAAGGATCGTGCTATGTTCTCTCACCAGATGCATTGCATGAAAGGAAGTGACAGAGGTTCTTATCTGGTATATCCTAAGAAGGGAGAAACCTGGGCAATTTTCAGACATTGGGATATTGGATGGAGTTCTAATCCAAAAAAGCATTCAGAATATCAATTTGAATATGTGGAAGTCCTATCTGATTTTGATGTGAATGTTGGGGTTAAAGTTACTTATCTTGGCAAAGTGAAAGGGTTTGTTAGTCTCTTTCAGCAAACTGTGCAGAATGGAATTAATGTAATTTGTGTTCCCCCTAAGGAGCTGTATAAGTTTTCTCATCGGATTCCTTCATATAAGATGGCTGGTGATGAAAGGGAAGGTGTTCCAGGAGGATCTTTTGAACTTGACCCTGCTGGTCTGCCTATTAGTCTTTTTGAAGTTGGGGATCCTGGTGACGTGAAGATGGAGGATGGAATGTTAAACAATGGAGTCAATTGTTCGCACCATGAATACAAGTGTAAAGTTGAACAGGCAATGTCTAATGAGAGTAATTACAAAGCAAAGTTGTGTGAGAGTAATGGTCCTGAAAGAGTTGTACCCATCCTTAGAAGATCACCAAGGTCAAATGGAAAATGTATGGACAATGGGCAAGCAGGCACTAGTCAACATATGGTCAGAGAGAATGACAAAGACATTAGCCACAGGAACTACAGTCAACCAGCGGGAACTGCTGTTACTTGCCAGACTAACGAGAAAGTCAAGACACCACAGAAAAATGAGAAGAATAATTATGATAGGGGAACATTGAAAGTTCGAAGGTCACCTAGAGATTTAAGCAAGAGAAATGATCTAGGAGATGCAGGTGAATGTACAACAGGCAAGTTGACTGATAATCATTCAAACACCAACAAAAATATAAAGGACAGCAATTTTTCCCAGTCTGCAGGAAGTGATCGTAAATATTTGAGAAAAGATGGCATAGTCAGTGGAGCATTGTGTTATGACTTTAAGGGAAAATCTGAGGAGATGTTTCAGTGTGATCAGATATGGGCAATATATGGTGATGGGGATAAAATGCCTGATATCTATGTTCAAATTAAGAAGATTGAATTCACCCCTAATTTTAGATTGCATGTGTCCGAACTTGAACCCTGTTCGCCACCAAAAGGCTTTAAAAGAACAATATCTTGTGGTACCTTCAAGGTTAAAAAAGCTAAACAGATTCTCTCTCTCTCTGCATTTTCTCATCAACTAAAAGTTGAACCCATGACAAATAACATATATGAAATTTACCCTAGAAAAGGTGAGATTTGGGCTCTATACAAGGACCAGAACTATAAACCGACTTCTTCAGACCAGGGCAGAGGTGAATGTCATATAGTAAAAGTATTAGCAGATGGTGACAAGTGCATAGAAGCTGTGGTTCTGATGCCTGTTAGTGGCTCTGAGCCAATTTTCAAGGCTCCCAGAATCCAGAGATCCAAGAATGGTATAATTGAAATATTAAGAGAAGAGGTTGGTAGTAGATTTTCGCATCAGATTCCTGTTTTTCAGTACAGTGGGGAAGACGATGTTTATCTCAGAGGGTGTTGGAGGCTTGATCCTTCTTCAGTTCCTGCTGAAGTGTAG 3306 0.4126 MECNKDEALRAKQIAENRMQSGDFVGALKFALKAKTLFPEIQNITQILTVCEVHCAAQNKLSGSDMDWYRILQTEQFADEVTIKKQYRKLALLLHPDKNRSAGAEAAFKLIGEANRFLSDPIKRSSYDFRIRGPVGTTAPKVQSYHSNRSSFGVKGDGNARNYQNIFHPDAHTWNSHQRDEQQTFWTSCPNCNTRYQYYKTILNATLRCQQCSKTFTARDMGYQGASTSHTWSSFINRKEPPKHVPPKEASKSNGGKTCGRGMEDKFVRSSPASMTKCTAGIGVHHEVEKGKDGHVAAGVTKAGVGTSNPATSKAKESQTSTNVGSKRARQSASDLRDNNKAGNGSGMKDTNVRENGVDLSGLNSGVHPRRSSRKKQDVSYTETAEVGDFESSSKRPRQHESFNTIELEKREVPSSGGLFNNNSAASSTAGVAGQNGATRNKASAPPEETVLRNKTEIEQSNVQRKEASKSDCPPSLEICCPDPDFSDFEKDKAEDCFAADQFWAIFDNTDSMPRFYALIKKVYSPFKLLITWLEADSNDQGEIDWHDAGLPVACGKFKLGCSQRTKDRAMFSHQMHCMKGSDRGSYLVYPKKGETWAIFRHWDIGWSSNPKKHSEYQFEYVEVLSDFDVNVGVKVTYLGKVKGFVSLFQQTVQNGINVICVPPKELYKFSHRIPSYKMAGDEREGVPGGSFELDPAGLPISLFEVGDPGDVKMEDGMLNNGVNCSHHEYKCKVEQAMSNESNYKAKLCESNGPERVVPILRRSPRSNGKCMDNGQAGTSQHMVRENDKDISHRNYSQPAGTAVTCQTNEKVKTPQKNEKNNYDRGTLKVRRSPRDLSKRNDLGDAGECTTGKLTDNHSNTNKNIKDSNFSQSAGSDRKYLRKDGIVSGALCYDFKGKSEEMFQCDQIWAIYGDGDKMPDIYVQIKKIEFTPNFRLHVSELEPCSPPKGFKRTISCGTFKVKKAKQILSLSAFSHQLKVEPMTNNIYEIYPRKGEIWALYKDQNYKPTSSDQGRGECHIVKVLADGDKCIEAVVLMPVSGSEPIFKAPRIQRSKNGIIEILREEVGSRFSHQIPVFQYSGEDDVYLRGCWRLDPSSVPAEV* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04038 1101 MobiDBLite consensus disorder prediction 302 473 - -
Rops8g04038 1101 SMART dnaj_3 66 123 IPR001623 -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 416 443 - -
Rops8g04038 1101 Pfam DnaJ domain 67 128 IPR001623 -
Rops8g04038 1101 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 235 265 - -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 852 875 - -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 795 812 - -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 452 466 - -
Rops8g04038 1101 PRINTS DnaJ domain signature 103 123 IPR001623 -
Rops8g04038 1101 PRINTS DnaJ domain signature 69 87 IPR001623 -
Rops8g04038 1101 PRINTS DnaJ domain signature 87 102 IPR001623 -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 305 351 - -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 795 875 - -
Rops8g04038 1101 CDD DnaJ 67 120 IPR001623 -
Rops8g04038 1101 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 389 408 - -
Rops8g04038 1101 Pfam Domain of unknown function (DUF3444) 893 1081 IPR024593 -
Rops8g04038 1101 Pfam Domain of unknown function (DUF3444) 478 683 IPR024593 -
Rops8g04038 1101 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1098 - -
Rops8g04038 1101 MobiDBLite consensus disorder prediction 813 843 - -
Rops8g04038 1101 Gene3D DnaJ domain 53 145 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04038 Rops-Chr8 81978389 81984919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04038 4 221 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.143 1.25e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04038 - - aprc:113861153 1579.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04038 8 81978389 81984919 Rops8g04038 8 81978389 81984919 ECH