Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g04008 ATGTTGTTGAGTAATGAGAGTAGCACTGTAGAAAGAAAGAAAGAAAGCCAGGTGAGAGAGTATAGGAATGGCATTGGTATTGGTATTGGCATGGCCTTCATTCCAATTCCCTCCTCTTTCAAAACCTCTATACTTCAACTCACACTTATCATCATCCTTACCCTTGTTCTCATCTTCTTCTTCTTCATAAATTTACCCTCCTCTCCCTCTCCCTCTCTTTCTCCTAAACGTAGATCACTCCTCACTTTCACATCTTGTTCCTCCCAATCCTCCAATGGCATCCTCAACTACCACTGCATTTTCCCTCAATACCCCTTCCTCTCCATCCCTACTCTCTCCCTCTTCCTCCTCCTCCACTTCTACATCCTCATCAAAACCGCTCAACTCCACTTCTCCGTCCTCACCACCAAGATCGCCTCTCACCTCAACCTCTCCCCTAGCATGGCCGCCGTCACTCTCCTCGCCCTCGGCAACGGCTCTCCCGACGTCTTCTCCTCCCTCGCCGCCCTCCGCGCCGGTCAATACCGCACCGGCTTCGGCGCCATCCTCTCCGCCGGTGCCTTCGTCTCCGCTCTCGTCGTCGGCTTCGTCGCTATCTATGCCGCTCCTTTTCCCGTCGATCCCGCTCCTTTCGTTAGGGATGTGTTGTTCTACTTAACCGCCGCCTTCTTCCTCTTCTACGTTTATCTCAGTGCTGAGATTTTTCTCTGGCAGGCAATTGGATTCGTTGCGTTCTACCTCTTCTTCGTTGGTTTTGTGTTTTATATGGATTTAGGTGTAGCGGATCGCGGGAAAAAGAGTTCTCCGGATCTCGAGGGACAAAACGAATCGGATTGCAACGTCAAAGTTTTGGAATCTCCTGAAGAAGAAAAACGCACTTCTGAATCGCGTTCAGCTTTTCATTTGATTTCTAAAGTATGGGAGCTTCCTGTGTTAACTCTCTTAAAGTTGACAATCCCTCAACCAGCACCATCGCAATGGAACAGATTTTATGCATCAGCCAATATCGCTCTTTGTCCACTAGCCCTCTTGTATGCCTGCAATTCATTCATGCCATTTAATCATCCCATAGTTTTCCTCCTCCCCAACACTCATTTCCCCCTCTGGTCAGTAGTGCTCATGACAAGCTTCTCTCTTGCATTTCTTCATCTTGTAATAGAAAAAGAACCCCCAAAAACAGAGCACTTGCCTGTGGTGGTCATGGCTTTTGTTATGAGCGTGTTTTGGATATCTGCTACAGCTGGAGAGCTGGTGAACTGCCTTGAAGTTCTAGGCACACTTCTCAAACTGCCACCAGCACTCCTAGGTCTTACGGTGCTGGCATGGGGAAATTCAGTGGGGGATCTTGTTGCTGATGTTGCAGTTGCTAGAGCTGGTCATCCAGCAATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTTGGTCTTGGAAGTGCTTTGGTCATACAGACAGCCAATGTATATCCTAAAGCCTATGAGCTTAATTTCCATGTTGGTATAGTGATCGCATTTGTGTTCCTGCTTCTAAGCCTTATGGGGTCTCTCTTGGTGATCACTTGGTGTAGATTCCGAGTGCCTAGGTTTTGGGGATTCTGTCTTGTAGGCCTATATATTGCTTTTATGGTAGCTAGTTTGGTAGTAGCCATGTTTTCAGGGTGA 1671 0.477 MLLSNESSTVERKKESQVREYRNGIGIGIGMAFIPIPSSFKTSILQLTLIIILTLVLIFFFFINLPSSPSPSLSPKRRSLLTFTSCSSQSSNGILNYHCIFPQYPFLSIPTLSLFLLLHFYILIKTAQLHFSVLTTKIASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRAGQYRTGFGAILSAGAFVSALVVGFVAIYAAPFPVDPAPFVRDVLFYLTAAFFLFYVYLSAEIFLWQAIGFVAFYLFFVGFVFYMDLGVADRGKKSSPDLEGQNESDCNVKVLESPEEEKRTSESRSAFHLISKVWELPVLTLLKLTIPQPAPSQWNRFYASANIALCPLALLYACNSFMPFNHPIVFLLPNTHFPLWSVVLMTSFSLAFLHLVIEKEPPKTEHLPVVVMAFVMSVFWISATAGELVNCLEVLGTLLKLPPALLGLTVLAWGNSVGDLVADVAVARAGHPAMAMAGCFAGPMFNMLVGLGSALVIQTANVYPKAYELNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYIAFMVASLVVAMFSG* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g04008 556 Gene3D - 144 269 IPR044880 -
Rops8g04008 556 Gene3D - 332 550 IPR044880 -
Rops8g04008 556 Pfam Sodium/calcium exchanger protein 113 254 IPR004837 GO:0016020|GO:0055085
Rops8g04008 556 Pfam Sodium/calcium exchanger protein 400 549 IPR004837 GO:0016020|GO:0055085
Rops8g04008 556 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 287 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g04008 Rops-Chr8 81502969 81507602 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g04008 38 555 Antiporters AT1G08960 66.667 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g04008 K13754 - gmx:100775437 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g04008 8 81502969 81507602 Rops8g04008 8 81502969 81507602 ECH