Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03994 ATGGACGATCAAGCAATTGAAATGCTCACTGAAAAATTTAATCAATTCGTCATTCACTGCAATTTGAAGCCATCGTCAGAACCAAACGTAGCAGATCAAGCTTGTGGAATAGATAACGCATCAGTGCAATTGAATGAGACCTCTGACAAAATGGATGAGAATAGTATGTCCAATGGAATCCATGAAATTTCTCCTGATCAAGGTCATACACTTCCAATATTGAAGAAAGTGCTTGAACTGAGTACCAAAGTTCTGAATTTGAAGAAACAACATGTAGCACTATCTGATCAAGTGAAACTCACAGCTGAGTCCTTTCCGGGCCTAGATGTTTCAAAGTCTGTTCAGCTTCTGGGTGCTGAATATGAACTCATGAAAAGAAAGTACCTGGAGGAGTCCTTTGAGCGTAGACGACTTTACAATGAAGTGATTGAACTCAAAGGAAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATGCAAGTGAAATTGCAAATGGATCAGCAGTATCTGTTGTCAATTTTGACTCATCTGCTGAGGAGCTTCAAGTCATTTGCTCTGATTCTTCTAAAAAGCAATTTAAATTTGATCATGTATTCAAACCTGAAGATAACCAAGAGGCTGTTTTTGAACAAACAAAACCTATCGCTACATCAGTATTAGATGGGTTTAATGTTTGCATTTTTGCATATGGCCAAACTGGAACTGGCAAGACATTTACCATGGAGGGAACCCCAGAGAATAGGGGAGTTAACTATAGAACCCTGGAGGAATTATTTCGGATATCTGAAGAGAGACAAGGCATAATAAAATATGAATTGCTTGTCAGCATGTTGGAGGTTTACAATGAGAAGATAAGAGATCTCTTGGCAGAAAATTCTTCCGAACCTACTAAGAAGTTGGAGATCAAGCAAGCTGCAGATGGAACCCAAGAAGTCCCAGGACTTGTTGAAGCTCGTGTATATGGAACAGAGGATGTTTGGGAAAGGCTGAAGTCTGGTAATCGAGTCAGATCTGTTGGATCCACCAGTGCTAATGAGCTTAGCAGTCGTTCTCATTGTTTGTTGAGAGTAACTGTCATCGGGGAGAATTTAATCAATGGCCAGAGAACAAGGAGTCACCTCTGGCTGGTAGACTTAGCTGGCAGTGAGCGTGTGGGGAAAACTGAAGCTGAAGGAGAAAGGTTGAAGGAATCTCAATTCATAAATAAGTCTCTATCAGCACTTGGTGATGTTATTTCAGCCCTTGCATCCAAATCATCCCACATACCTTACAGGAACTCAAAGCTCACTCATATACTCCAGAGTTCTTTAGGAGGAGATTGCAAAACTTTAATGTTTGTCCAGATAAGTCCAAGTATGACTGACTTAACAGAGACACTTTGTTCACTGAATTTTGCCACACGTGTTCGAGGAATTGAGAGTGGCCCTGCCCGCAAGCAAGCAGACTTCACTGACCTGTTAAAGTACAAGCAAATGGCAGAAAAGCTCAAACATGATGAGAAGGAAACTAGAAAATTACAAGATAACTTGCAGACTATGCAAATGAGACTAGCTGCAAGAGAACTCATGTGCCGAAATCTTCAAGAAAAGGTTCGGGACCTTGAGAACCAGATAGCAGAGGAGAGAAAAATCAGACTAAAGCAAGAAAGTAGGTCACTTGCTGCAGTTTCAGCTCAACCTTCAACAATGTCATCAGTAAAACACACAGCAGCTGAGAAAGCCATAAAGAAGCCACCACTAAATCCTTCAAAAAGGCCACCACTGAGAAGAATTACTAATTTCTTGCCTCCGCCCTCAGAGAGAAGGCCCTCATCCTCGTGTAGCTCTTCCATGGAGAGAAAGGAAAACATTGCCAGAACAACCTCAATGAATACAAATACAGAAGGCCCGGTGAAACCAAGAAGAAGGGTATCCATTGCTGTGAGACCACCACCTGCACCTGCACCATCAAAAACACAGGTCCTTCAGCCTAGAAGGCGAGTTTCTATAGCTACAGTTCGTCCCGACTCAACTTCTGACATGACAACCCCACTTCGTGGAAGCAGTGTTCAGCAACCAATGATAAGGAACCAAAGGAAAGCTCGGTATTCAAGGTTGTTCGCCCCAATGCCAACAACATCGGTCGAGACAACGCCAACTTTGATGAGGAGCAGCAATAAGTTTGCGGGCAGTCCAACACAGGCAGATTCACGGATGGTGAGGCATCCAACTGGCCTTGCACTGCAACGCAAATCTTTAATATGGAGTCCTCTCCAGCTGAGAGGCCTGAAAAATAGCAGAAAGTCATCACTCTTGCCGCCATCGCGGCTCTACACCGAAATGCAATGA 2328 0.4283 MDDQAIEMLTEKFNQFVIHCNLKPSSEPNVADQACGIDNASVQLNETSDKMDENSMSNGIHEISPDQGHTLPILKKVLELSTKVLNLKKQHVALSDQVKLTAESFPGLDVSKSVQLLGAEYELMKRKYLEESFERRRLYNEVIELKGNIRVFCRCRPLNASEIANGSAVSVVNFDSSAEELQVICSDSSKKQFKFDHVFKPEDNQEAVFEQTKPIATSVLDGFNVCIFAYGQTGTGKTFTMEGTPENRGVNYRTLEELFRISEERQGIIKYELLVSMLEVYNEKIRDLLAENSSEPTKKLEIKQAADGTQEVPGLVEARVYGTEDVWERLKSGNRVRSVGSTSANELSSRSHCLLRVTVIGENLINGQRTRSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSSHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSMTDLTETLCSLNFATRVRGIESGPARKQADFTDLLKYKQMAEKLKHDEKETRKLQDNLQTMQMRLAARELMCRNLQEKVRDLENQIAEERKIRLKQESRSLAAVSAQPSTMSSVKHTAAEKAIKKPPLNPSKRPPLRRITNFLPPPSERRPSSSCSSSMERKENIARTTSMNTNTEGPVKPRRRVSIAVRPPPAPAPSKTQVLQPRRRVSIATVRPDSTSDMTTPLRGSSVQQPMIRNQRKARYSRLFAPMPTTSVETTPTLMRSSNKFAGSPTQADSRMVRHPTGLALQRKSLIWSPLQLRGLKNSRKSSLLPPSRLYTEMQ* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03994 775 ProSiteProfiles Kinesin motor domain profile. 148 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 PANTHER KINESIN-LIKE PROTEIN KLP-3 73 608 IPR027640 GO:0003777|GO:0007018
Rops8g03994 775 MobiDBLite consensus disorder prediction 552 568 - -
Rops8g03994 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 508 IPR027417 -
Rops8g03994 775 Gene3D Kinesin motor domain 143 515 IPR036961 -
Rops8g03994 775 CDD KISc_C_terminal 146 473 - -
Rops8g03994 775 MobiDBLite consensus disorder prediction 550 689 - -
Rops8g03994 775 PRINTS Kinesin heavy chain signature 422 443 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 PRINTS Kinesin heavy chain signature 373 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 PRINTS Kinesin heavy chain signature 222 243 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 PRINTS Kinesin heavy chain signature 342 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 MobiDBLite consensus disorder prediction 598 631 - -
Rops8g03994 775 MobiDBLite consensus disorder prediction 655 689 - -
Rops8g03994 775 Coils Coil 489 551 - -
Rops8g03994 775 SMART kinesin_4 146 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 ProSitePatterns Kinesin motor domain signature. 372 383 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops8g03994 775 Pfam Kinesin motor domain 154 472 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03994 775 FunFam Kinesin-like protein 143 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03994 Rops-Chr8 81342184 81346514 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03994 114 478 Calmodulin-binding Proteins AT5G65930 42.740 7.78e-78 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03994 K10406 - gmx:100788477 1070.84