Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03938 ATGGGGCATTTATCCTCTATGTTCAATGGGTTGGCAAGGTCGTTTTCAATAAAGAAAGGAAGAAGTTCTGGAAAATGTGGTGGGAGAGAAGCTGCTGAAGCAATGGCAAAAGAAGCTAAGAAAAATGACTTGATATTGCGTAGCTCAGGCACGGTTAATGTTGATGATTCAAACAACTTTGCCTCAGTTTTCTCCAAAAAAGGAGAGAAAGGAGTGAACCAGGATTGCTGCATGGTGTGGGAGGAATTTGGATGCCAAGAGGATATGATCTTCTGTGGGATATTTGATGGGCACGGGCCATGGGGTCACTTTGTGGCCAAAAGAGTAAGCGAGTCAATGCCACCTTCTTTGTTATGCAACTGGCAGGAGACACTTGTTCAAACTTCACTTGATCCAGATATTGATATAGAGGAAGAGAAAAAGCAACATTGGTTCAATATATGGAAGCATTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTAGTGCAGTATCGCAAGATTGACTCATTTTACAGTGGAACAACTGCCCTCTCAATTGTTAGGCAGGGTGAACTCATTGTCGTAGCAAATGTTGGTGACTCTCGTGCTGTATTAGCTACAACATCAGATGATGGAAGTTTGGTACCCGTTCAGCTAACAGTTGATTTCAAGCCCAATTTACCACAAGAAGAAGAGAGAATAATTCAGTGCCAGGGGCGAGTGTTCTGCTTACATGATGAGCCAGGGGTGCACAGGGTGTGGTTACCAGATGAAGAGTCTCCAGGATTAGCCATGTCTAGAGCCTTTGGTGACTATTGCATTAAAGAATATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAATATAAGCAACAAAGACCAGTTTGTTGTGCTAGCCACAGATGGGGTTTGGGATGTAATCTCTAATCAAGAAGCAGTAGATATTGTATCTTCAACACCAGACAAAGCAAAAGCAGCTAAACGTTTGGTGGAGTGTGCAGTTCATGCATGGAAACGCAAGAGGAGGGGCATTGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTCCCCTTTCATCAGATCAAGTTAACCAAGTTGCCTCGCTAAAATAG 1107 0.4309 MGHLSSMFNGLARSFSIKKGRSSGKCGGREAAEAMAKEAKKNDLILRSSGTVNVDDSNNFASVFSKKGEKGVNQDCCMVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVSESMPPSLLCNWQETLVQTSLDPDIDIEEEKKQHWFNIWKHSYLKTCAAIDQELVQYRKIDSFYSGTTALSIVRQGELIVVANVGDSRAVLATTSDDGSLVPVQLTVDFKPNLPQEEERIIQCQGRVFCLHDEPGVHRVWLPDEESPGLAMSRAFGDYCIKEYGLISVPEVTHRNISNKDQFVVLATDGVWDVISNQEAVDIVSSTPDKAKAAKRLVECAVHAWKRKRRGIAMDDISAICLFFHSPLSSDQVNQVASLK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03938 368 SMART PP2C_4 47 350 IPR001932 -
Rops8g03938 368 Pfam Protein phosphatase 2C 84 330 IPR001932 -
Rops8g03938 368 FunFam Probable protein phosphatase 2C 34 51 354 - -
Rops8g03938 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Rops8g03938 368 PANTHER PROTEIN PHOSPHATASE 43 350 IPR015655 GO:0004722|GO:0006470
Rops8g03938 368 SUPERFAMILY PP2C-like 59 353 IPR036457 -
Rops8g03938 368 CDD PP2Cc 59 352 IPR001932 -
Rops8g03938 368 Gene3D - 49 354 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03938 Rops-Chr8 80540444 80543718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03938 1 353 PP2C-type Phosphatase Gene Family AT3G05640 74.157 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03938 - - gmx:100808955 659.833