Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03931 ATGGAAACAGAGCAAGTTTTGCCATTTTCTGCTGTTTCTGTGGTTGAAGATGTTCTTCAACAACATGGTGGCCGGTTAGATGTCAACTTGGCATCAAGAAAAGCTGAAGAAGCTTCTTTGAGAAGGTATGAAGCAGCTGGTTGGCTACGAAAGACTGTTGGAGTTGTTGGAGGGAAAGACTTGCCAGCTGAGCCTTCTGAAGAAGCCTTCAGAATTGGATTGCGTGGTGGGATTATCCTTTGCAATGTTCTTAACAAAATTCAACCTGGGGCAGTGCCCAAGGTGGTTGAAGGTCCCGGTGATTCTGTTCTTATTCCTGATGGGGCAGCACTGTCTGCATATCAATACTTTGAAAATGTAAGGAATTTTCTTGTAGCTGTGGAGGAAATGGGGCTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGATAGTGAATTGTGTTTTGGCGCTCAAATCCTACGCTGAATGGAAACTTGGAGGAAGAAGTGGGTCACGGAAATTTTGTGGGAGTGGGAATCCAAAGCCACCTACTGGGAAACCAATTTTGAGGAAAAACTCAGAACCATTCATGAAGTCTTTGTGGAATATGTCATTAGGGGACAGAGATGGTTACATGAGTGATCCCTCTTCATACAGTGACCCAGGACTTGATCAAAATAGAGGGGGTTCCTTCCCTTCTTTGAATTCACTAGTTCGTGAATATTTGTCTGACAAGAAGCCAGAAGAAATTCCCATTGTAGTGGAGTCCCTGCTTAGCAATATCATGGAGGAGTTTGAACGTCGCATGCAACTCCAACAAGAAAAGGTTAAAACAACTCAAGAAGATAAGGCATCGTCTGAAGCAGAATGTTCAATTTCAAAAGCTGCTTCTGTTGATGAAGAGATGGAAATAAAGATGGAAGAAAAGGAAGATGAACAGGACTTGCAAGATAAACAAGAGGAATGTTACGATGAAAAGTGCAACGATTATGAAGAATCAAGCAGCCAGGTTTTGAAGCAGCAGAAGTTAGTCCAACAACAGGATAGAAGCATCCAGGAATTGAAAACCATTGTCCATCAAACAAAATCAGGAATGCAGTTTCTGCAAATGGAATACCAGAAGGAGATCCTCTCTCTAAATAAGCACCTGCATAGCCTAGCTTCTGCTGCTTCAGGATATCATAAAGTTCTTGACGAGAACCGCAAGTTATACAATCAAGTACAGGATCTGAAAGGAAATATAAGGGTGTACTGCCGAGTTCGACCCTTCTTGGGTGGGCAACCAAACCATCAGAGTGCTGTCAGTAACGTGGAGGAGGGAGGTATCTCAATCCTAACACCTTCCAAATACGGGAAAGAGGGGAAGAAGACATTTAATTTCAACAGAGTGTTTGGTTCTTCAGCAACCCAAGGGGAAGTTTTCTCAGATACTCAGCCTCTGATTCGTTCTGTTCTTGATGGTTACAATGTGTGTATATTTGCATATGGCCAGACAGGATCAGGAAAAACATACACTATGTCTGGACCAGATGATCTTAACGACGAAACCATAGGTGTCAATTACCGTGCACTGAGAGATCTTTTTGTTCTATCAGAGCAAAGGAAAGACATCATTTGCTATGAAATCTCTGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTGCTAGCCACAGATGGTGCTAACAAAAGATTAGAAATTCGAAATAGTTCCCATAATGGCATCAATGTGCCAGATGCGAACCTTGTTCCAGTTTCATCGACTTCTGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGGGCTACAGGTGCTACAGCCATGAATGATCGTAGCAGTCGTTCTCATAGCTGCCTAACAGTTCATATTCAAGGAAAGAACCTGACATCAGGAAGTACTCTTCGTGGTAGTATGCATCTTGTTGACCTGGCAGGAAGTGAGAGGGCTGATAAAACTGAGGCCACAGGGGATAGACTCAAGGAGGCTCAACATATCAACAAGTCGCTTTCTGCCTTAGGAGATGTAATTTCTTCACTTTCCCAAAAGAATGCACATGTTCCCTACAGGAATAGCAAACTTACTCAGCTGCTTCAGGATTCTCTTGGAGGGCAAGCAAAGACCCTCATGTTTGTTCATATTAGTCCGGAATATGACGCTCTTGGAGAAACACTTAGTACACTGAAGTTCGCTGAACGTGTCTCTACTGTCGAACTTGGTGCTGCCCGAGTTAATAAAGATAATTCAGAGCTGAAAGAGCTTAGAGAACAGGTTGCTAATCTGAAGGCAGCCTTAGCAAGAAAGGATGGAGGAGAAGCAGAACATGTTCCACAATCTGTGAATAGTGGCCATGAAATACCAAAGTTGAAATCATATGCTTCTTCTCCTCCTATACAGCAGCGTGGTTGGACTTCTGGAGGAGGCCGTAAGCTGCCAAGAGATGATTCTAGTAGCATAGAGAAAAAGGATGCATCGAAGCTGAAGAGACGAAGCCTAGATCTCCAAGACATGTATAGAAGACAACAAGTTAGAAGCAGTCATGGAAAAGAAGAATCAGTTTCTGGGGATTGGGTGGATAAGATTGCTACTATGAACAGGAATGACAGCTTAACTAGCGATGATAGCCTTGTGGGACAATGGGAAGCAGAAAGCAAACAATTTTCTCCATTGTTAAGTCCCACTTCTCTTTCAGAGTCTTCCAAATTACTATGCTTGGAACCCGGGTATGAATCTGATGAGCTTGACATTGCAACTAGTGATTCTTCAGAATCAGACTTGAATTGGCTATCACATGCACCCAAACCAACCGGATTAGCCTCTAAACCAAAGAAAACAACTAAATCCAGACCAGCAAAGAACCCAGAAACCAGGAGTATGATCCCATCATTAATTCCTACTCCATCAAGGAAACAACCCACACTAGTTAATCCAACCAGAAAGCTTCCAGGATCCGGTGATGTGAAGAGAAGGCCTGGGAGTGCAAAGTGA 2991 0.4296 METEQVLPFSAVSVVEDVLQQHGGRLDVNLASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEAFRIGLRGGIILCNVLNKIQPGAVPKVVEGPGDSVLIPDGAALSAYQYFENVRNFLVAVEEMGLPTFEASDLEQGGKSSRIVNCVLALKSYAEWKLGGRSGSRKFCGSGNPKPPTGKPILRKNSEPFMKSLWNMSLGDRDGYMSDPSSYSDPGLDQNRGGSFPSLNSLVREYLSDKKPEEIPIVVESLLSNIMEEFERRMQLQQEKVKTTQEDKASSEAECSISKAASVDEEMEIKMEEKEDEQDLQDKQEECYDEKCNDYEESSSQVLKQQKLVQQQDRSIQELKTIVHQTKSGMQFLQMEYQKEILSLNKHLHSLASAASGYHKVLDENRKLYNQVQDLKGNIRVYCRVRPFLGGQPNHQSAVSNVEEGGISILTPSKYGKEGKKTFNFNRVFGSSATQGEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPDDLNDETIGVNYRALRDLFVLSEQRKDIICYEISVQMLEIYNEQVRDLLATDGANKRLEIRNSSHNGINVPDANLVPVSSTSDVINLMNLGHKNRATGATAMNDRSSRSHSCLTVHIQGKNLTSGSTLRGSMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVISSLSQKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEYDALGETLSTLKFAERVSTVELGAARVNKDNSELKELREQVANLKAALARKDGGEAEHVPQSVNSGHEIPKLKSYASSPPIQQRGWTSGGGRKLPRDDSSSIEKKDASKLKRRSLDLQDMYRRQQVRSSHGKEESVSGDWVDKIATMNRNDSLTSDDSLVGQWEAESKQFSPLLSPTSLSESSKLLCLEPGYESDELDIATSDSSESDLNWLSHAPKPTGLASKPKKTTKSRPAKNPETRSMIPSLIPTPSRKQPTLVNPTRKLPGSGDVKRRPGSAK* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03931 996 MobiDBLite consensus disorder prediction 915 996 - -
Rops8g03931 996 Gene3D - 32 162 IPR036872 -
Rops8g03931 996 PANTHER KINESIN-LIKE PROTEIN KLP-3 46 954 IPR027640 GO:0003777|GO:0007018
Rops8g03931 996 FunFam Kinesin-like protein KIN-14I isoform A 407 780 - -
Rops8g03931 996 Pfam Kinesin motor domain 418 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 CDD KISc_C_terminal 410 740 - -
Rops8g03931 996 CDD CH_AtKIN14-like 41 158 - -
Rops8g03931 996 MobiDBLite consensus disorder prediction 953 979 - -
Rops8g03931 996 MobiDBLite consensus disorder prediction 767 855 - -
Rops8g03931 996 MobiDBLite consensus disorder prediction 814 855 - -
Rops8g03931 996 ProSiteProfiles Calponin homology (CH) domain profile. 39 161 IPR001715 GO:0005515
Rops8g03931 996 ProSiteProfiles Kinesin motor domain profile. 412 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 FunFam Kinesin-like protein KIN-14I isoform A 26 178 - -
Rops8g03931 996 Pfam Calponin homology (CH) domain 42 161 IPR001715 GO:0005515
Rops8g03931 996 SMART kinesin_4 410 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 Coils Coil 745 772 - -
Rops8g03931 996 Gene3D Kinesin motor domain 407 778 IPR036961 -
Rops8g03931 996 SMART ch_5 41 159 IPR001715 GO:0005515
Rops8g03931 996 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 412 770 IPR027417 -
Rops8g03931 996 Coils Coil 253 288 - -
Rops8g03931 996 ProSitePatterns Kinesin motor domain signature. 638 649 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops8g03931 996 PRINTS Kinesin heavy chain signature 608 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 PRINTS Kinesin heavy chain signature 688 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 PRINTS Kinesin heavy chain signature 486 507 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 PRINTS Kinesin heavy chain signature 639 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03931 996 SUPERFAMILY Calponin-homology domain, CH-domain 42 166 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03931 Rops-Chr8 80445210 80451620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03931 400 738 Calmodulin-binding Proteins AT5G65930 42.690 2.90e-77 274