Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03923 ATGAGCTATTCTCCTCGAACCTTCCCCTTGTGGCAATCTCAGCACTGGGGTGACGAAAGGGGTGTTCAAATTCAAACCCACCACTCAAAGCGGAAACGTGAAGATTCACCTCAGTTAGAGTCCTGCTGTATCATTGGAAATTTGGGGTCTCTACTTCGTATCAGGACTGATGACATCGTGCCGTGGGTGACAGATTTGACTCAGAGAGTGGTACAAGAGGAGTTGGAAACCCGACTCCAACTAGATCATCAAAGACCAACTATCAATCAGACTGGAATATCAGGAGCCAAATTCTTTAAGTTGGTTTTTGAGAATGAATTGCCTGCTCCAATTTTTACTCAGTCCAAGATCAAAGCTAAAGACAAGACTCCTGTAAAGATTGCTCTTTTTGATATTAAATCTCAGTCTATAGTTACTGATGGTCCACTGTCTTCGATCAAGATACAGATTTGTGTCCTTAATAGTGAGTTGGGTTCCAATGGCAGTGAAGACTGGAAATCAGAAGAATTCAAGGCCAAAATCATACGTCCAAGAGACAATAAAGGGAAGTTATTGACAGGAGATACAGTTATTACACTGCAAAATGGAGTTGGTTATATCTCTGAGATTGTGTTCACTGATAACTCAAGCTGGACAAGAAGCGGACGTTTTAGGTTAGGAGCCAAAGTTGTGCAACCAAATTTCAATGAGACAAAGATCAGGGAAGGTATAAGTAAACCTTTTAGGGTCAAGGATAACAGAGCGAATCAGAAACACTACCCTCCATCTCCTCATGATGAAATATGGCGTTTAAGAAAGATATCAAAAAAAGGTAAACTCCATGAGCGGCTGTCTTTGCACGGAATAAACACTGTCAAGGATCTGTTGCAGCTGCATGAAACCGATCCATCTTCTTTGCAAGAGAAATTTGGCGATATTTCAGCAAAGCAACGGGAAGCAATTATTGAGCATGCTAAGACTTGTGTTGTTGAGATGACATTTGATGGACAAAATTATCGTTCACAGGATATTCTCAGCTCCGTCGAGAAGGGGTTGGGGGATGCATACAGAAATGACCAAGATTTGATTCCAGTTGACGACAGTTTGCCGAGCCCATTGGCAACTCTGCAATCTGCAGGGCAATGTGGTGCTCGAAATATGCAAACTTTACAGCAAGATCAACTAGAAAAAAGGCAAGATCTTGGTCAACCATCTACATCAACATTGCACATTGGTGAAGCAGAACATGACCAAAGACTCAATTTGCAAATGATACCTCCTTTTCCGAATGGGGCCAAAGATATGAATGGCACGCTTAGGAGGAGCAGAATTTAG 1314 0.4201 MSYSPRTFPLWQSQHWGDERGVQIQTHHSKRKREDSPQLESCCIIGNLGSLLRIRTDDIVPWVTDLTQRVVQEELETRLQLDHQRPTINQTGISGAKFFKLVFENELPAPIFTQSKIKAKDKTPVKIALFDIKSQSIVTDGPLSSIKIQICVLNSELGSNGSEDWKSEEFKAKIIRPRDNKGKLLTGDTVITLQNGVGYISEIVFTDNSSWTRSGRFRLGAKVVQPNFNETKIREGISKPFRVKDNRANQKHYPPSPHDEIWRLRKISKKGKLHERLSLHGINTVKDLLQLHETDPSSLQEKFGDISAKQREAIIEHAKTCVVEMTFDGQNYRSQDILSSVEKGLGDAYRNDQDLIPVDDSLPSPLATLQSAGQCGARNMQTLQQDQLEKRQDLGQPSTSTLHIGEAEHDQRLNLQMIPPFPNGAKDMNGTLRRSRI* 438
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03923 437 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Rops8g03923 437 PANTHER OS02G0177800 PROTEIN 66 360 IPR012416 GO:0005516
Rops8g03923 437 MobiDBLite consensus disorder prediction 418 437 - -
Rops8g03923 437 Pfam Calmodulin binding protein central domain 257 321 IPR046830 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops8g03923 Rops-Chr8 80362060 80367830 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03923 66 322 Calmodulin-binding Proteins AT5G57580 39.259 1.05e-56 196
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03923 - - gmx:100798493 387.882