LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g03922	ATGAATAAATTGCCTCCATCATTTTTCACACAGCTCAAAATCACAGCTGAGGGTGATGTTCCACTTCAAATCGAGCTGCGTGATGCTTCACATCAGCAACGCATAGTCAGGGATGAGAAGATCCGGATCTGTGTCCTAGATGGTGACTTTGGATCCAATGGAAATGAGGATTGGACTGCAGAAGAATTTAATGCCCAAACTTTAAGTCCAAGAGAGGGAAAAGGACCATTACTGAATGGAGGAGATACGGTCATTACTCTCAAAAATGGAGTTGGCCACATCGGTAACAACATCGTGTTTACTGATAACTCGAGCTGGACAAAGAGCAAAACGTTCCTTTTAGGGGTTAAAATAGTGAAATCTAATTCCACTGGAGCTGAAATTAGAGAAGGTAGAAGTGAACCTTTCAAGGTCTTGGATTACCGAGGACAGGCGTATAAAAAACATGAATGTCCATCATTGAATGATGAGGTATGGCGTCTGAGGCAGATAGGAAAAGGTGGTGAACTTCTCAAGCAGCTGCTCTCGCATGGAATAAAAAATGTCAAGGATCTTTTGCGGTTGCTCACAACCAATCCAGCTTTACTAGGAGAGACGACTATCAGCTCTACATTTATCACTCAGCTGAACAATCCATATTCCTTGTCCTCAATTGCATCTGAGGTTGTGGGGATGACTTATGATAGGCAAAATTATCGTTCTATACAATCTGTGAATTCGGAAGAGAAGTTTTTGGTTGAAATAGTCAAGCAGCAAGCATACAACAACTTGAAGGATCTGATGCCACTTGAGACCACAATACATGGCTTGGTGAACACACTTACAGGTGTACAAACTGCACAATATGATCAAGGTCTGCAACAGTTTGATATTCCAATTGTTCAGCAAGGCCAACCAGGAACATGGGCATCCTCCTCAGCACTAGTTATTGATGGAGCCACACAGATTGATCAACTGCCAGTGTTGGGAATTGATGATGGAATCGGATGGGATCAATTTGAAAGTCACTTTCCTACTCCTAACCAATGGGACCCATCCTTTGCTTATGGTGATGGAACAGGATCTAGCAATCATTCCTTTGTCCCCAACTCTGCTGAGAATATACCAAGCAAAGGGAGAAGCAAGAAAGTTTGGCATAAGATTCGAAGTGCTTTCAAATGGGTCATACTGCATATTGCTAAAAGGAACGCCAAACTTTTTCCCCATCACTATTAA	1215	0.4222	MNKLPPSFFTQLKITAEGDVPLQIELRDASHQQRIVRDEKIRICVLDGDFGSNGNEDWTAEEFNAQTLSPREGKGPLLNGGDTVITLKNGVGHIGNNIVFTDNSSWTKSKTFLLGVKIVKSNSTGAEIREGRSEPFKVLDYRGQAYKKHECPSLNDEVWRLRQIGKGGELLKQLLSHGIKNVKDLLRLLTTNPALLGETTISSTFITQLNNPYSLSSIASEVVGMTYDRQNYRSIQSVNSEEKFLVEIVKQQAYNNLKDLMPLETTIHGLVNTLTGVQTAQYDQGLQQFDIPIVQQGQPGTWASSSALVIDGATQIDQLPVLGIDDGIGWDQFESHFPTPNQWDPSFAYGDGTGSSNHSFVPNSAENIPSKGRSKKVWHKIRSAFKWVILHIAKRNAKLFPHHY*	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g03922	404	Pfam	Calmodulin binding protein-like N-terminal domain	2	140	IPR046831	-
	Rops8g03922	404	Pfam	Calmodulin binding protein central domain	153	199	IPR046830	-
	Rops8g03922	404	Pfam	Calmodulin binding protein C-terminal domain	221	261	IPR046829	-
	Rops8g03922	404	PANTHER	OS02G0177800 PROTEIN	2	278	IPR012416	GO:0005516

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g03922	Rops-Chr8	80355160	80357083	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g03922	2	256	Calmodulin-binding Proteins	AT5G57580	35.172	6.45e-45	162

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Rops8g03922	8	80355160	80357083	Rops8g03922	8	80355160	80357083	ECH