Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03920 ATGGCATCGAAGAGGACATCTCAGGAAGAAGGTCAGGGTAATGATGACAAGGATCTTCAAGTTCCTAGTAAGCGGAAACATGGCAACCCTCCAGAAGAACAGACAGAGACCCGGCACCTTTCATTTCTTACTGCTGCCAATACTAATGCCGTGAATGAGATCGCCTTGTGTTTGAAACCAGTGATTCGAGAAGTGATACTAGAGGTGATTCCACCTATGCTCCAGCGTTACCTATCCCCGTGTAGTGGATTATTTTCGCTTGATCAACAGACTTGCAAATTTGGAGGCAGAGCTTTGCGATTGTGCTTCATGAATAAATTGCTTCAACCATTTTTCACACAGCTCAAAATCACAGCTGAGGGTGATGTTCCACTTCAGGTTGAGCTGCGTGATGCTGCACTTCAGCAAAGCATAGTCAGGGATGAGAAGATCCGGATCTGTGTCCTGGATGGTGACTTTGGATCCAATGGAAATGAGGATTGGACTGCAGAGGAATTTAATGCCCACACTTTAAGTCCAAGAGGGGGAAAAGGAGCATTACTGAATGGAGATACGGTCATTACACTCAAAAATGGAGTTGGCTACATCACTAACAATATTGTGTTTACAGATAACTCGAGCTGGACAAAAAGCAAGACGTTCCGTTTAGGAGTTAAAATAGTGCAATCTAATTCCATTGGAGCTGAAATTAGAGAAGCTAGAAGTGAACCTTTCAAGGTCTTGGATTACCGAGGACAGGCGTACAAGAAACATGAATGTCCATCATTGAATGATGAGGTATGGCGTCTGAAGAAGATAGGAAAAGGTGGTGAACTTCTCAAGCAGCTGCTCTCGCATGGAATAAAAACTGTCAAGGATTTTTTGCAGTTGCTCACAACCAATCCAACTTTACTACGAGAGATAATGGGCAACATTCCAAGGAAGTCAAGGGATACAATTATTGCACATGCTAAAAGTTGTGTTGTAGACGACTATCAGCTCTACATTTATCACTCAGCTGAACAATCCATATTCCTTGTCCTCAATTGCATCTATGAGGTTGTGGGGCTGACTTATGATAGGCAAAATTATCGTTCTATACAATCTGTGAATTCGGAAGAGAAGTGTTTGGTTGAAATAGTCAAGCAGCAAGCATACAACAACTTGAAGGATCTGATGCCACTTGAGACCACAATACATGGCTTGGTGAACACACTGACAGGTGTACAAACTGCACAATATGATCAAGGTCTGCATCAGTTTGATATTCCAATTGTTCAGCAAGGCCAACCAGGAACATGGGCATCCTCCTCAGCACTAGTTATTGATGGAGCCACACAGATTGATCAACTGCCAGTGTTGGAAGAAATGCCACTAAACTGGTCTGCATCAACATATATTGATGATGGAAGATGGGATCAATTTGAAAGTCACTTTCCTACTCCTAACCAATGGCCTTTCTCCTTTGCTTATGGTGATGGAACAGGATCTAGCAATCATTCCTTTGTCCCTAACTCTGCTGAGAATATACCAAGCAAAGGGAGAAGCAAGAAAGTTTGGCATAAGATTCGAAGTGTTTTCAAATGGAGTGTGGAGCCAGCCATGGTGGACGGCCCTTGTTCATCCAATGTTCTCACCCAGCGCAAACAAGTTCAGTCAAAGCTACAATGGCTTCCACCCAGCGTGTGGTTGAAGCTAAGCAGGATCAGCTATTCAACGTTTCCTCGAACCTTCCTTTTTGTGCAGAGGGGTGATGAAAGGGGTGTTCAAATTCTAACCCACCAATCAAAGCGGAAACGTGAAGATTCACCACAGTCACGGTCCTGCTGTGTCAATGGAAATTTGAGGTCTCTGCTTCGTATAAGTAATGATGACATCGTTACTTGTGTGAAAGATTTAGCTCAAAGAGTGATACGAGAGGAGTTGGAAAGCCGACTCCAACGAGATCAAAGACCAGCTATCAATCAGACTGGAATATATGGAGCCAAGTTCTTTGAGTTGGTTTTTGAGAATGAATTGCCTGCTACAATTTTTACTCAGTCCAAGATCAAAGCTAAAGACAAGACTCCTCTTAAGATTGCTCTTTATGATATTAGATCTCAGTGTATAGTTACTTATGGTCCACTGTCTTCGATCAAGATACAGATTTGTGTCCTTAATAGTGAGTTGGGTTCCAATGGCAGTGAAGACTGGGATTCAGAAGAATTCAAGGCCAAAATCATACGTCAAAGAGACAATAAAGGGAAGTTATTGACAGGAGATACAGTTATTACACTACAAAATGGAGTTGGTTATATCACCGAGACTGTGTTTACTGATAATTCAAGCTGGACAAGAAGCGGACATTTTAGATTAGGAGCCAAAGTGTTGCAACCAAATTTCAATGAGGCAAAGATCAGGGAAGGTATAAGTAAACCTTTTATGGTCAAGGATAACAGAGGAGAGTCGAATCAGAAACACTACCCTCCATCTCCTCATGATGAAATATGGCGTTTAAGAAAGATATCAAAAAATGGTAAACTCCATAAGAGGCTGTCTTTGCACGGAATAAACACTGTCAAGGATCTGTTGCAGCTGCATGAAAAATCTTCTTTGCAAGAGAAATTTGGAAATATTTCAAGAAAGCAACGGGAAGCAATTATTGAGCATGCTAAGACTTGTGATCGTTCACAGCATACTCTCAACTATGACGACAAGCGGTTGGGGGATGCTTACAGAAATGTCCAAGATCTGATTCCAGTTGACGACAGCTTGCCGAGCCCATTGTCAACTCTGCAATCTGCAGGGCAATGTGGTGCTCCAAATTTGCAAACTTTACAACAAGATCAACTAGGGAAAAGGCAAGATCTTAGTCAACCGTCTACCTCAACATTGCACATGGGTGAAGCAGAAGTAGGTTTTGAAGAGCTCTTATCTGGAAGGTGCGGGGAAGGGAATATTTTGTCCCTCATTGAATCACATATTCCATCACCAACGCATGTTGTTGATTCCACCGTCAATGAGCTTCTAGGGATTCAATTTGCAAATGATTCCTTTTCCGAATGGGGCCAAAGATACGAATAG 3042 0.4231 MASKRTSQEEGQGNDDKDLQVPSKRKHGNPPEEQTETRHLSFLTAANTNAVNEIALCLKPVIREVILEVIPPMLQRYLSPCSGLFSLDQQTCKFGGRALRLCFMNKLLQPFFTQLKITAEGDVPLQVELRDAALQQSIVRDEKIRICVLDGDFGSNGNEDWTAEEFNAHTLSPRGGKGALLNGDTVITLKNGVGYITNNIVFTDNSSWTKSKTFRLGVKIVQSNSIGAEIREARSEPFKVLDYRGQAYKKHECPSLNDEVWRLKKIGKGGELLKQLLSHGIKTVKDFLQLLTTNPTLLREIMGNIPRKSRDTIIAHAKSCVVDDYQLYIYHSAEQSIFLVLNCIYEVVGLTYDRQNYRSIQSVNSEEKCLVEIVKQQAYNNLKDLMPLETTIHGLVNTLTGVQTAQYDQGLHQFDIPIVQQGQPGTWASSSALVIDGATQIDQLPVLEEMPLNWSASTYIDDGRWDQFESHFPTPNQWPFSFAYGDGTGSSNHSFVPNSAENIPSKGRSKKVWHKIRSVFKWSVEPAMVDGPCSSNVLTQRKQVQSKLQWLPPSVWLKLSRISYSTFPRTFLFVQRGDERGVQILTHQSKRKREDSPQSRSCCVNGNLRSLLRISNDDIVTCVKDLAQRVIREELESRLQRDQRPAINQTGIYGAKFFELVFENELPATIFTQSKIKAKDKTPLKIALYDIRSQCIVTYGPLSSIKIQICVLNSELGSNGSEDWDSEEFKAKIIRQRDNKGKLLTGDTVITLQNGVGYITETVFTDNSSWTRSGHFRLGAKVLQPNFNEAKIREGISKPFMVKDNRGESNQKHYPPSPHDEIWRLRKISKNGKLHKRLSLHGINTVKDLLQLHEKSSLQEKFGNISRKQREAIIEHAKTCDRSQHTLNYDDKRLGDAYRNVQDLIPVDDSLPSPLSTLQSAGQCGAPNLQTLQQDQLGKRQDLSQPSTSTLHMGEAEVGFEELLSGRCGEGNILSLIESHIPSPTHVVDSTVNELLGIQFANDSFSEWGQRYE* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03920 1013 MobiDBLite consensus disorder prediction 1 37 - -
Rops8g03920 1013 PANTHER OS02G0177800 PROTEIN 47 462 IPR012416 GO:0005516
Rops8g03920 1013 MobiDBLite consensus disorder prediction 1 34 - -
Rops8g03920 1013 Pfam Calmodulin binding protein C-terminal domain 326 386 IPR046829 -
Rops8g03920 1013 Pfam Calmodulin binding protein-like N-terminal domain 659 805 IPR046831 -
Rops8g03920 1013 Pfam Calmodulin binding protein-like N-terminal domain 99 242 IPR046831 -
Rops8g03920 1013 Pfam Calmodulin binding protein central domain 255 320 IPR046830 -
Rops8g03920 1013 Pfam Calmodulin binding protein central domain 818 880 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03920 Rops-Chr8 80225388 80237821 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03920 594 904 Calmodulin-binding Proteins AT5G57580 35.976 5.00e-56 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03920 - - lja:Lj1g3v4083120.1 523.472