Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03918 ATGGCATCGAAGAGGACATTTCAGGAAGAGGGTCAGGGCAATGATGACAGGGATCTTCGAGTTCCTAGTAAGCGGAGACACGGCAACCCAGAAGAAGCAAAGACCCGTGCTGCTGCCGGTAATCATGCCGCCAATGAGATCGCGTTGTGCTTGAAACCCGTAATTCGAGAATTGATGCAAGAGATGATGCAAGAGGTGATGGAAAAGGTGATTCCAACTATGCTCCAGCGTAACCTATCCCCATGTAGTGGACTATTAACCCTCAACCAGCAGACTGGCACATCTGGAGGCAGAGCTTTGCAATTGTGCTTCATGAATAAATTGCCTCAAGTTATTTTCACACAGCTCAAAATCACAGCTGAGGGTGGTGCTGCACTTCAAGTTGAGCTGCGTGATGCTTCACGTCAGCAACGCATAGTCAGGGATGAGAAGATCCGGATCTGTGTCCTAGATGGTGACTTTGGATCCGATGGAAATGAGGATTGGACTGCAGAGGACTTCAATGCCCAAACTTTAAGTCCAAGAGAGGGAAAAGGACCATTACTGAATGGAGTTACGGTCATTACACTAAAAAATGGAGTTGGCTACATCCCTAACAATATTGTGTTTACTGATAACTCAAGCTGGACAAAAAGCAAAACGTTCCGTTTAGGAGTTAAATTAGTGCAATCTAATTCCATTAGAGAAGGTAGAAGTGAACCTTTCAAGGTCTTGGATTACCGAGGACAGGCGTACATGAAACACGAACGTCCATCGTTGAATGATGAGGTATGGCGTCTGAAAAATATAAGAAAAGGTGGTGAACTTCACAAGCAGCTGATCTCGCATGGAATAAAAACTGTTAAGGATCTTTTGCAGTTGTACACAACCAATCAAGCTTCACTACGAGAGAGAATGCGCAACATTTCAAGGAGGTCGTGGGATGTAATTATTGCACACGCTAAAGGCTGTGTTGTAGACGATGATCAGCGCTACATTTATCAAGCAGCAGCAGAACAAGACATATCCCTTGTCTTTAATTGCATCTATGAGGTTGTGGAGGTGATTTTTAATGGGCGAAATTCTCGTTCTATTCAATCTCTGAATCTGGAAGAAGAGCGTTTTGTGGAAAGAGTTAAGCAGCAAGCTTACAACAATTTGAAGGATCTGAAGCCACTTGAGATTGGCATGGTGAAGACACTTACTGGTGGACAAACTGCACTATATGGTGGTCCAGATCAAGGCCAACCGGTAACGTGGGCTTGCTCCTCAACATCAGTTATTAATGAAGCCTCTGGGAGCGAGTTTGAGGATGCTGCATCAGCACCTATTGATTCATGGGATGCCTTATTTGCAAGTTTCTTAGATGATTCTCCCAATTGGAACCCATCAAATCCCAATTGGAACCCATTAAATCCTTTTGACGCTGGTGATGGATCGGAAGCTAGCAATCATCCTACTTTCCCCTGA 1449 0.4444 MASKRTFQEEGQGNDDRDLRVPSKRRHGNPEEAKTRAAAGNHAANEIALCLKPVIRELMQEMMQEVMEKVIPTMLQRNLSPCSGLLTLNQQTGTSGGRALQLCFMNKLPQVIFTQLKITAEGGAALQVELRDASRQQRIVRDEKIRICVLDGDFGSDGNEDWTAEDFNAQTLSPREGKGPLLNGVTVITLKNGVGYIPNNIVFTDNSSWTKSKTFRLGVKLVQSNSIREGRSEPFKVLDYRGQAYMKHERPSLNDEVWRLKNIRKGGELHKQLISHGIKTVKDLLQLYTTNQASLRERMRNISRRSWDVIIAHAKGCVVDDDQRYIYQAAAEQDISLVFNCIYEVVEVIFNGRNSRSIQSLNLEEERFVERVKQQAYNNLKDLKPLEIGMVKTLTGGQTALYGGPDQGQPVTWACSSTSVINEASGSEFEDAASAPIDSWDALFASFLDDSPNWNPSNPNWNPLNPFDAGDGSEASNHPTFP* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03918 482 Pfam Calmodulin binding protein-like N-terminal domain 100 239 IPR046831 -
Rops8g03918 482 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Rops8g03918 482 MobiDBLite consensus disorder prediction 1 33 - -
Rops8g03918 482 PANTHER OS02G0177800 PROTEIN 1 407 IPR012416 GO:0005516
Rops8g03918 482 MobiDBLite consensus disorder prediction 454 482 - -
Rops8g03918 482 Pfam Calmodulin binding protein C-terminal domain 324 384 IPR046829 -
Rops8g03918 482 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03918 Rops-Chr8 80206135 80215209 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03918 49 404 Calmodulin-binding Proteins AT5G26920 35.806 1.60e-69 226