LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g03917	ATGATGCTTCCTCGCTTCTTCCTTTTGGTCAACTTTGCGGTTTCTATGCAATCTCGCAGGGAGCACGAACGCATTGGCAAAATTCCAATTCAGGAATCTAAAAGGGGCCATGGTGATGCAAAACAAGCATCGATCAGTGGCCTTAGAAATGTGATAAATGAACTACGGATGAATGACCACAGTTCCTACTTGGAAACTTTCCTGAGAAAAGTGGTAGGAGAGGAGGTGGAACGCAAAGTCCAGGATCACCTATTTTCAAGAGCAAGGGTTATTCAGGCTGGCATATCTGGAGCCAAACCCTTACAGCTGTGTTTTATTAATAAGTTACATGATACAATTTTTACTCTGTCTAATATAATATCAGAGGACGAATCACCCATTCAAATTGCTCTATTTGATGTTAGATCTCAGTCTATAGTCAATGATGGTCCTCTCTCCTCAATAAAGATTGAGATTTGTGCCCTCAATGGTGAGTTTGGATCTTGTGGCAGTGAGGATTGGACTGAAGTTGAATTTAATGCCAATATCTTACGTGAAAGAGATGGTAAAGAGCCATTGTTGATTGGAGAGAGGTTTATTACTCTCAAAAATGGAGTTGGTTGTATCAATAAAATTACCTTCACTGATAACTCAAGATGGCTAAGAAGCAGAAGGTTCAGGTTAGGAGCCAAAGTTGTGCAACCAACTTCAAGTGGAGAAAACATTATTAAGGAAGGTAGAAGTGAATCTTTTGTGGTCAAAGATAACAGAGGAGAGTCTTACAAGAAACACCACCCTCCATCATTGAAAGATGATATTTGGCGTTTGGAGAAAATTGCTAAAGCAGGAAAAATTCACAAGCGGCTCTCTCTCCATGGAATTCACACTGTTCAGGATCTCTTGCAATTATACACAACCAACTCATCTTCCTTATATGAGAAATTTGGCAACATTCCAAAGAAGTCACGGTTTGCTATCATTGAACATGCCAAGACCTGTGTGATAGATGATTACAAGCTTTACAGCTATTACACAATAGATCAATCTATAGGTCTGCTATTCAATTCCATCTACATGCTTGTGGCAGTCACATTTGATGGCCAAAATTATTGCTCACCAGATACTCTCATGCCCAGTGAGAAGCATTTGGTAGAAATAGTGAAGCAGGATGCTTACAAAAATGTGCATGATTTGAAATCAATTGATGAAACTTTGTTGAACTGCTTAAACCTAGCGGCATGTCTAAAAGCAGGAGCTGCAGGGCAGTCAGACGCTTCAGTTCAAGGTCTGCAATTTATTGATATCTCATCAGCACAAGGTCAAAAAGAAACATGTCCAGGTTATTTTCAACCATTTATCTCTGCTTCATATACTGATGAAGGAATGCATAATTACCAAATCTATGCTGATCCACAGTCAGACTTAGGAGAAATACCACAAAACAGTCATGTGGAAGATGAATTTTCCTCTGGAATATACATTGAAAGGGATGGTTGTCACCTTAATGGATTACATTTTCCAGTTGTGCAAGGTGGTTACTCAACAGAGAATGAGAGTTCTGAGATTCAATTCATAGATGGTTGTTCTCCTTATACAACATGGGGGCCAGAAAATGGCTTTTTCGTTGGTTCTTCTGATGGAGCAGAATTTAGCAGTCATTCTACTTTCCTCAATTCTGCTATGGAACCATCAAGCAGTGGGAAACCCAAAGCAGTGTGGTGTAAGATTCGGGCTGCTCTCAGATGGGTCATATCAGTGAGAAAGGATGCAGCTGCTAGAAAGAACGCTGCCAAGTTGCTTTACTATAACTATTAG	1794	0.3991	MMLPRFFLLVNFAVSMQSRREHERIGKIPIQESKRGHGDAKQASISGLRNVINELRMNDHSSYLETFLRKVVGEEVERKVQDHLFSRARVIQAGISGAKPLQLCFINKLHDTIFTLSNIISEDESPIQIALFDVRSQSIVNDGPLSSIKIEICALNGEFGSCGSEDWTEVEFNANILRERDGKEPLLIGERFITLKNGVGCINKITFTDNSRWLRSRRFRLGAKVVQPTSSGENIIKEGRSESFVVKDNRGESYKKHHPPSLKDDIWRLEKIAKAGKIHKRLSLHGIHTVQDLLQLYTTNSSSLYEKFGNIPKKSRFAIIEHAKTCVIDDYKLYSYYTIDQSIGLLFNSIYMLVAVTFDGQNYCSPDTLMPSEKHLVEIVKQDAYKNVHDLKSIDETLLNCLNLAACLKAGAAGQSDASVQGLQFIDISSAQGQKETCPGYFQPFISASYTDEGMHNYQIYADPQSDLGEIPQNSHVEDEFSSGIYIERDGCHLNGLHFPVVQGGYSTENESSEIQFIDGCSPYTTWGPENGFFVGSSDGAEFSSHSTFLNSAMEPSSSGKPKAVWCKIRAALRWVISVRKDAAARKNAAKLLYYNY*	598

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g03917	597	Pfam	Calmodulin binding protein C-terminal domain	332	393	IPR046829	-
	Rops8g03917	597	PANTHER	OS02G0177800 PROTEIN	52	467	IPR012416	GO:0005516
	Rops8g03917	597	Pfam	Calmodulin binding protein-like N-terminal domain	101	249	IPR046831	-
	Rops8g03917	597	Pfam	Calmodulin binding protein central domain	261	326	IPR046830	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g03917	Rops-Chr8	80199056	80204159	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g03917	62	587	Calmodulin-binding Proteins	AT4G25800	34.079	9.87e-84	272

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g03917	-		-	gmx:100816427	772.311