Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03915 ATGGAGGTGCTCCCATACCAAAACGTTGGATCCTCTTACGTAGCTGGTACCAACCTACATGATGTGAATATTAGAAACATGAACAACAACAACAACATGTGGGTAGGGAGGAGCGTGAACACTCCATCTTGGTATTCTTATGAACCATCTCGAGAACGTGGCATGAAGACGGTGAACACAGGGTGGTGGAATGATCCTGAGAGGAAGAGGAAACTCAGAGTGTCCAAATACAAATTTTATGCGGCTGAAGGGCTCTTGAATTTTGAAAACGGGGGCTCTGAAGGATTTCTCGTTTCAGGAAAACGAGAAATGGAGATGGAGAAAAAACGTTCCAAGGGAAGCTTCCTCAGCTTGTTTGATTGGAATGCCAAATCTCGAAGGAAGCTGCTTTGGAACAATGCTACCTTACCTGAGGTTTCAAAGCAAGGAAAGGAAAATGTGGAGGCCTTGCTAGAGTCACAGCTCAGTAGGATAAAGGTGGATGAAAATGGAGCAAGTCCAAATAATAATGCAAATTGTGATTTTAACTGTGCCCTATCAATTTGTAGTGATGAAGGATGTGAGAGTAAAGCCCCTGGGTTAGTAGCTAGACTCATGGGTTTGGATTCGTTGCCAGCTTCAGCAGGCACTGAGCTCTCCTGCACTTCATTGTATGGCTCTAATTCTCATGGAGCTTCTCATTTTAATGAGGGTGCTCTTCATTCAATGGATGACTTTCGCCCTGCAAACTACATTAACACACCACGTAAGCTGGAGAAGTCTTCTTGGGATGCCATGGAACCAAGGTCACAGAAAATGGAAAACCGGCCATTAAAGAGATTTCAAACCGAAATTTTGCCTCCAAAGTCTGCTAAACCCATTCCAGTTACTCACAATAGACTGTTGTCTCCTATCAAGAGTCCTGGTTTTCTGCCACCGAAGAATGCAGCTCACTTAATGGAGGCAGCTGCTAAGATAATTGATGCAAGCCCTCGGCCATATATGAGGAATGGAATGCCATCAGTTAGGCCTTCATCTGTTCCCTTGAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACATTATGCATCCATGCCTGAAAAGCTTGTGGATCCAAGCAATGCCAACCCAGCAAATGGCAATCAGAGTGAGAGGAGCAGTAACTTGTATAAATGTACTTCAGCATTCAAAGCTTCAAGAGATTCAGAGAAAAATAGTTCTTGCCATGTAGCAAGTAAAGGGAAACCAGATTCACTTGCAGTACAAGCCAAAACCAATGTTCAAAATAGAGATGCATCGATTTCAAATGGTAATAGGAAACATTTGAAGCAGAATGAGATAAAGTCAAACCAGCTCCCAAGGAGCCAGAAACCAAGTACACACCGAGCCATGCAGCAGAGAACTTGCACAAGCCGGAATAGCAATGTGCTTAGGCAGAATAATCAAAAGCAAAATAGCATGACCACCAAAGGTAAATCAACTTCAAAAATAGATTCCAATAAACCAACTACACGAGCTTCATCTTCAGCAAGTTCTACTGGAACAAGGAAGACAGCAAACAAGGGTGCTATAAATCCCAATACTCAGCCTAAAAGGTCAAGCTCTAGGGCAATGGATAACCAAAAGGAGTTTCTGCCATCAAAAACAGAAAGTATTTCCCAAAAGAAAAAGTATAGCAGCAGAGATGTTCAAGAGGCAAGAGGTCCTGATAATGCAGTAAATAATTTTCAAAGTAAGTCCGTAAAATGCAATTTTACAACTGATGGAAGTATTGATCAGGATGCATTTAACATGAAAGAAAGCAAGGATGTTATTTCATTTACATTTACATCTCCCTTGAGGAGAAGCATGCCTGAGTCACCATCCTCTACTGAGCAAGCAATGGGAACCGAAAATAGAATTGCTGTCAACTCTCTTGGGCATAGTGATAAACTTTATCCCGAAAATTTATCATTATCTCCGCCAGGGTTAAATATGATAGATAGTGATGCTTTAAGCATCCTGTTGGAGAAAAAGCTGCAAGAATTGACATCTAGACTTAACTTACCTCAATGTACCCTGGCCACAGAGGGATCCTCTACTGGTTCAAGATCTAGTTTGCAAGACAAATTTCCCAGTATGGCAAGCACCACATCTAAGGAACAAGGCAAAAGCTTTCACCCTGCCCTGTTTAGTGATAAACTAGATAGCATGCATGACTATCAGTGTTGTTCAAGTGATGATCCAGTGCTTAACATGAATCAGAAACTTCAGACATCAGAAGTAAGGGAAGATCCTAGCTGTAGCAGCAACAGTGAAAGTGGAAATGGTCTAGGTTGTCAGCAAACTCCTTTTGTCTGTGAAAGTTCCTTGGATAGTGAAGACAGTACATATGGCAGCACAGTTTATTCTTCTATGCAAGATGAAGAAGTATTCTACTTTTCCCTGATAAATGAATCAGTATCACTTGAAAATGAGGTGAAATGGTCAGAGCAAAGCTCTTCCACATTGGTGGGTGGAAATATGGCTGTCAAACAAATAAGTGGAATAACAAATTTGGTAGAATTTAAAATATCTAGTAACAAGGAACTTAAATATGTACATGATATAGTAGGCAATGCAGAGTTTATGGCGGAAGAATTTGTCATGGGTCAAACTGATACGGTCATAATGCCAAATCTCTTTGATCTGTTGGAGAATCAGGGTAACAGAACAGAAAACTATGGAGAAGAGTGCTCTAAGCTTGAAAGGAAGGTTTTATTTGACTGTGTAAACGAGTGCCTAGAGTTGAGATGTAAGCAAGCTTTTGTTGGAAGTGGCAAAGCTTGGTCTAGATGGGTGACATCAGTTCAGAGGAAGAGCTTGTTGGCAGAGGAATTGGACAAGGAGATTCTGGGTTTTAGAAGCATGGAAGAGGTAATGGTGGATGAGCTTGTCAGCAAGGACATGAGCACTGGATGTGGGAAATGGCTTGACTTTGACATTGAAGCATTTGAAGAGGGTTTAGAGGTTGAGCAGGACATACTAGCTTATTTGATTGATGAATTGGTTTCTGATTGGTTGCTTGGTTAA 3033 0.4135 MEVLPYQNVGSSYVAGTNLHDVNIRNMNNNNNMWVGRSVNTPSWYSYEPSRERGMKTVNTGWWNDPERKRKLRVSKYKFYAAEGLLNFENGGSEGFLVSGKREMEMEKKRSKGSFLSLFDWNAKSRRKLLWNNATLPEVSKQGKENVEALLESQLSRIKVDENGASPNNNANCDFNCALSICSDEGCESKAPGLVARLMGLDSLPASAGTELSCTSLYGSNSHGASHFNEGALHSMDDFRPANYINTPRKLEKSSWDAMEPRSQKMENRPLKRFQTEILPPKSAKPIPVTHNRLLSPIKSPGFLPPKNAAHLMEAAAKIIDASPRPYMRNGMPSVRPSSVPLRILDLKERLEAAHYASMPEKLVDPSNANPANGNQSERSSNLYKCTSAFKASRDSEKNSSCHVASKGKPDSLAVQAKTNVQNRDASISNGNRKHLKQNEIKSNQLPRSQKPSTHRAMQQRTCTSRNSNVLRQNNQKQNSMTTKGKSTSKIDSNKPTTRASSSASSTGTRKTANKGAINPNTQPKRSSSRAMDNQKEFLPSKTESISQKKKYSSRDVQEARGPDNAVNNFQSKSVKCNFTTDGSIDQDAFNMKESKDVISFTFTSPLRRSMPESPSSTEQAMGTENRIAVNSLGHSDKLYPENLSLSPPGLNMIDSDALSILLEKKLQELTSRLNLPQCTLATEGSSTGSRSSLQDKFPSMASTTSKEQGKSFHPALFSDKLDSMHDYQCCSSDDPVLNMNQKLQTSEVREDPSCSSNSESGNGLGCQQTPFVCESSLDSEDSTYGSTVYSSMQDEEVFYFSLINESVSLENEVKWSEQSSSTLVGGNMAVKQISGITNLVEFKISSNKELKYVHDIVGNAEFMAEEFVMGQTDTVIMPNLFDLLENQGNRTENYGEECSKLERKVLFDCVNECLELRCKQAFVGSGKAWSRWVTSVQRKSLLAEELDKEILGFRSMEEVMVDELVSKDMSTGCGKWLDFDIEAFEEGLEVEQDILAYLIDELVSDWLLG* 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03915 1010 Pfam Domain of unknown function (DUF4378) 850 1002 IPR025486 -
Rops8g03915 1010 Pfam Domain of unknown function (DUF3511) 63 84 IPR021899 -
Rops8g03915 1010 Coils Coil 885 905 - -
Rops8g03915 1010 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 103 1006 - -
Rops8g03915 1010 MobiDBLite consensus disorder prediction 413 434 - -
Rops8g03915 1010 MobiDBLite consensus disorder prediction 745 764 - -
Rops8g03915 1010 Pfam DUF761-associated sequence motif 183 207 IPR032795 -
Rops8g03915 1010 MobiDBLite consensus disorder prediction 395 569 - -
Rops8g03915 1010 MobiDBLite consensus disorder prediction 358 381 - -
Rops8g03915 1010 MobiDBLite consensus disorder prediction 442 547 - -
Rops8g03915 1010 MobiDBLite consensus disorder prediction 683 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03915 Rops-Chr8 80180292 80188194 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03915 106 1010 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 32.644 6.60e-109 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03915 - - gmx:102663635 1295.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03915 8 80180292 80188194 Rops8g03915 8 80180292 80188194 ECH