Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03883 ATGGCTTCGGTTGGCGTGGCACCAACATCAGGCTTGAGAGAATCCAGTGGTGTTGATAGATTGCCAGAGGAGATGAATGATATGAAAATTAGAGATGATAAAGAAATGGAAGCCACTGTTGTTGATGGTCATGGAACAGAGACAGGGCATATCATTGTAACTACTATTGGAGGTGGAAATGGTCAGCCCAAGCAGACTATAAGCTATATGGCAGAGCGGGTTGTTGGGCATGGATCATTTGGGGTTGTCTTCCAGGCTAAATGCTTGGAGACTGGTGAAACTGTGGCTATCAAAAAGGTTCTTCAAGACAAGAGGTATAAAAACCGGGAGCTGCAAACAATGCGTCTTCTTGACCACCCAAATGTTGTCTCTTTGAAGCATTGTTTCTTTTCAACCACTGAAAAAGATGAACTATACCTTAATTTGGTACTTGAGTATGTTCCTGAAACAGTTCATCGCGTGATCAAACATTACAACAAGTTGAACCAACGCATGCCACTGATATATGTGAAACTCTATACATACCAGATCTTTAGGGCACTATCTTATATCCATCGTTGTATTGGAGTCTGCCATCGGGATATCAAGCCTCAAAATCTATTAGTTAATCCACATACCCACCAGGTTAAATTATGTGACTTTGGAAGTGCAAAAGTCTTGGTAAAAGGCGAACCAAATATCTCGTACATATGTTCTAGATATTATAGAGCACCTGAACTTATATTTGGAGCAACTGAATATACTACAGCTATTGACATTTGGTCTGTAGGTTGTGTATTGGCTGAGCTTCTGCTTGGACAGCCTTTGTTCCCTGGTGAAAGTGGAGTTGATCAGCTTGTTGAGATCATCAAGGTTCTGGGTACTCCTACAAGGGAAGAGATTAAGTGCATGAACCCTAACTATACAGAATTTAAATTCCCACAGATTAAAGCACATCCATGGCACAAGATCTTTCATAAGCGCATGCCACCAGAAGCTGGTGATTTGGTATCAAGACTACTGCAATACTCCCCTAACCTGCGGTGCACAGCTTTAGATGCCTTGACCCATCCCTTCTTTGATGAACTTCGTGACCCAAACACTCGCTTGCCAAATGGTCGTTTCCTTCCACCATTATTCAATTTCAAATCTCATGAACTGAAGGGAGTCCCAGTTGAGATTTTGGTGAAATTGATTCCAGAGCATGCGAGGAAGCAATGTTCGTTTCTTGGCTTGTGA 1218 0.4204 MASVGVAPTSGLRESSGVDRLPEEMNDMKIRDDKEMEATVVDGHGTETGHIIVTTIGGGNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSVGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAGDLVSRLLQYSPNLRCTALDALTHPFFDELRDPNTRLPNGRFLPPLFNFKSHELKGVPVEILVKLIPEHARKQCSFLGL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03883 405 SMART serkin_6 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03883 405 Gene3D Transferase(Phosphotransferase) domain 1 149 397 - -
Rops8g03883 405 CDD STKc_GSK3 64 356 IPR039192 -
Rops8g03883 405 ProSitePatterns Protein kinases ATP-binding region signature. 75 99 IPR017441 GO:0005524
Rops8g03883 405 Gene3D Phosphorylase Kinase; domain 1 54 148 - -
Rops8g03883 405 Pfam Protein kinase domain 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03883 405 ProSiteProfiles Protein kinase domain profile. 69 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03883 405 MobiDBLite consensus disorder prediction 1 22 - -
Rops8g03883 405 SUPERFAMILY Protein kinase-like (PK-like) 68 379 IPR011009 -
Rops8g03883 405 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Rops8g03883 405 FunFam Shaggy-related protein kinase kappa 149 397 - -
Rops8g03883 405 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 33 399 - -
Rops8g03883 405 FunFam Glycogen synthase kinase-3 beta 53 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03883 Rops-Chr8 79781962 79786758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03883 75 381 MAP Kinase Gene Family AT2G43790 35.110 3.98e-55 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Rops8g03883 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03883 K00924 - gmx:100795659 789.645