Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03873 ATGGATGGTGATTCACAAGAGGAGGAGGATTTGGTTTCAAACATAGTGATCATGGTGGTGTCCATGATGCTGATGGTATTGATCACCATTGTTGTTGTTGCCAACATAGGGGGTTCCCAACAAATCTCAGGGACTATGAAGACCCTTAATTCAGTTTGTAGTAAAACAGATGAACCAGAAAGCTGTTTCCTTGTCTTAAAACACGGAAAGGATTCATTTGCAAAGATATGGGTTTCACTGCCCCAGCTAATTCTCGTCCTTTCTGATCATGCAACATTCTTCAACTGCAAATTAGAAGGTGAGGAAGGTACCCTATATGCAGTAGCACAACGCCAATTCTACCGGGACTGTGAGATTCATGATAGTGTGGACATCATCAAGGGAGATTCAGCAACTGTAATTCAGAACTCACAAATCATTGTGAAGGCTAGAAATTCTTCTGATATGGTTTTAAGGAAAAATGTAGTGAGTGCTCAATCCAGGTTAGACAAGTATGAGAGAACTGGGTTTGTGATCCAAAACTGCACCATCACAGCACAAGGGGAAATCAACAATAGTCTTGTTGCTACCACTTACTTGGGTGACAGTCATAATGGAAATCATATCTAG 609 0.4105 MDGDSQEEEDLVSNIVIMVVSMMLMVLITIVVVANIGGSQQISGTMKTLNSVCSKTDEPESCFLVLKHGKDSFAKIWVSLPQLILVLSDHATFFNCKLEGEEGTLYAVAQRQFYRDCEIHDSVDIIKGDSATVIQNSQIIVKARNSSDMVLRKNVVSAQSRLDKYERTGFVIQNCTITAQGEINNSLVATTYLGDSHNGNHI* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03873 202 SUPERFAMILY Pectin lyase-like 84 195 IPR011050 -
Rops8g03873 202 Gene3D - 82 201 IPR012334 -
Rops8g03873 202 PANTHER PECTINESTERASE 86 194 - -
Rops8g03873 202 Pfam Pectinesterase 86 194 IPR000070 GO:0030599|GO:0042545
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03873 84 194 Carbohydrate Esterase AT4G33230 41.964 2.04e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03873 - K01051 gmx:102665007 182.956