Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03868 ATGATCAATATTCATCGTCCAAAAAGCAGACATGGAACAGTAAACACTGTTCCAACTTTTGGACGAGATCCAAGCAGCGTTGTTTTCCCAGAACTTGAGAGAGATCTTTTTCACTATCATCAAGGTGCATACAAAATGGATTATCGATGGACCAATGGTAAGCAGGAAACTGGTGGCCGTGACAGGAGGCAATACAAAAAGGAAAAGGCTTATCAGGACTCCGTTATTGAGGATTTGTCGGAGGATTTTCGTTTGCCTATCAACCACAGGCCAACGGAGAATGTTGATCTGGACAATGTAGAACAAGCATCTCTGGACACCCAGTTAACACCATCTAATATTGGCTTTAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGGAAGGATGAACAAGGAATCGTTGAGCCAATAAAATCTGGGATGAGAGATCCAAGACTGGGGGTTGGTAAACAAGAAGAAGATGATTTTTTCACTGCAGAAGAAAACATCCAGCGAAAAAAACTTGATGTTGAGTTGGAGGAGACGGAGGAACATGTGAGGAAGCGGGAGAAGGCAGCATATAGCATATATGCATGTCTTTTGACCGGATTGGTGTTAGCGGAACGTGAGCAAAAAATTCAAACCGAGGTGAAAGAAATCCGAAAGGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTGGCAATGGAATTCGAAGCACACTTGAGCTCTTATGATCACAATCACAGAAAGCGTTTCAAACAAATGAAGGAAATGCACGGTGGTAGTAGTCGGGATGATAGGCAAAAGCGGGAGCAGCAGCGTCAAGAGAGAGAAATGGCCAAGTTTGCTCAAATGGCTGATGCCCAGAAGCAGCAACGGCTTCAACTGCAGCAAGAGTCTGGATCAGCACCAGTTTCCTCTGAATCTAGAACTGCTACTGCACTCACGGATCAGGAGCAGCGAAATACTTTGAAGTTTGGGTTTTCTTCTAAAGGCAGTGCTTCCAAGAACATGGTTGGTATCAAGAAGAAAAATGTTGCAAAGAAGCCAAATGCTCCAATGCCCTCTATATTTAGTAATGATAGCGATGAAGAGTGA 1092 0.4332 MINIHRPKSRHGTVNTVPTFGRDPSSVVFPELERDLFHYHQGAYKMDYRWTNGKQETGGRDRRQYKKEKAYQDSVIEDLSEDFRLPINHRPTENVDLDNVEQASLDTQLTPSNIGFKLLQKMGWKGKGLGKDEQGIVEPIKSGMRDPRLGVGKQEEDDFFTAEENIQRKKLDVELEETEEHVRKREKAAYSIYACLLTGLVLAEREQKIQTEVKEIRKVFYCDLCNKQYKLAMEFEAHLSSYDHNHRKRFKQMKEMHGGSSRDDRQKREQQRQEREMAKFAQMADAQKQQRLQLQQESGSAPVSSESRTATALTDQEQRNTLKFGFSSKGSASKNMVGIKKKNVAKKPNAPMPSIFSNDSDEE* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03868 363 ProSiteProfiles G-patch domain profile. 111 156 IPR000467 GO:0003676
Rops8g03868 363 MobiDBLite consensus disorder prediction 286 334 - -
Rops8g03868 363 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 46 363 - -
Rops8g03868 363 Pfam G-patch domain 112 152 IPR000467 GO:0003676
Rops8g03868 363 Coils Coil 168 188 - -
Rops8g03868 363 MobiDBLite consensus disorder prediction 253 281 - -
Rops8g03868 363 SUPERFAMILY beta-beta-alpha zinc fingers 218 254 IPR036236 -
Rops8g03868 363 SMART G-patch_5 109 154 IPR000467 GO:0003676
Rops8g03868 363 Coils Coil 277 297 - -
Rops8g03868 363 Pfam Zinc-finger double-stranded RNA-binding 220 247 IPR022755 -
Rops8g03868 363 ProSitePatterns Zinc finger C2H2 type domain signature. 222 244 IPR013087 -
Rops8g03868 363 MobiDBLite consensus disorder prediction 253 363 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03868 46 363 C2H2 Transcription Factor Family AT5G26610 61.059 2.90e-121 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03868 - - gmx:100793206 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03868 8 79601185 79607409 Rops8g03868 8 79601185 79607409 ECH