Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03859 ATGGCGAGACTTTTCTGGGTTGGCATTGCAATAGTGCTTGTTTTAAGCAACTGGGTTGAAGGGTTTGTAGGATATGAACATCATTTCAATGAAACTGAGCTGTCTTTGTTGGAAGCTCATGAAGCTTCCTTATCCTCGGTTGGGAGAAATCCACTGCTGGTAGGACTCACCCTTATTCACAATGCTGCTGCTAAAGGAGCAGTCTGCTTGGATGGAACATTACCTGGTTACCATTTGCATCGTGGATATGGATCAGGAGCAAATAGCTGGCTTGTTAATTTAGAGGGAGGTGGATGGTGTAATAATATCAGAACGTGCGTTTATCGCAAGAAAACCCGGCGTGGATCATCAACATTCATGGAAAAGGAGATACCATTTACGGGAATACTAAGTAATAAAGCTGAAGAAAATCCAGATTTTTTCAATTGGAACAGAGTAAAGCTTCGTTATTGTGATGGTGCCTCATTTGCTGGGGATAGTGAACATCAGACTGCACAACTGCAATTCAGAGGACAGCGTATTTGGGCAGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGTTTTGCCAACCAGGCTCTTCTTTCGGGATGCTCTGCGGGTGGCCTGGCTACTATTATACACTGTGATGAATTTCGAGGTCTCTTTCCAAAGACTACTAAAATCAAGTGTCTAAGTGACGCTGGGTTGTTTCTTGATTCGACTGATGTATCTGGAGGGCGTACTCTCAGGAATTTATACAGCGGTGTCGTAGGATTGCAGGGAGCGCAGAAGAATCTACCACAAATTTGTACTAATCACCTTGATCCCACCTCGTGCTTCTTCCCTCAGAATTTGATTGCCAGTGTTAAAACCCCGCTATTCATCCTTAATGCTGCTTATGATTCATGGCAGATCCAGTCCAGTTTAGCTCCTCCATCAGCAGATCCCAGTGGCTATTGGCATGAATGCAGATTAAACCATGCTAAATGTACTAGAACCCAAATCCAATTTCTGCAAGGATTCAGGAATCACATGCTGAATGCTATTAAAGACTTCTCAAGATCAAAGCAGAATGGATTGTTTATTAATTCATGTTTTTCTCACTGTCAAACCGAGAGGCAGGATACATGGTTTGCTGACGATTCTCCTGAGATTGGAAATAAGGCAATTGCTGTGGCTGTTGGAGATTGGTATTTCGATCGAGCGGGTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGTCACCATTTGGTTTTCAGATGA 1254 0.4306 MARLFWVGIAIVLVLSNWVEGFVGYEHHFNETELSLLEAHEASLSSVGRNPLLVGLTLIHNAAAKGAVCLDGTLPGYHLHRGYGSGANSWLVNLEGGGWCNNIRTCVYRKKTRRGSSTFMEKEIPFTGILSNKAEENPDFFNWNRVKLRYCDGASFAGDSEHQTAQLQFRGQRIWAAAMEDLMSKGMRFANQALLSGCSAGGLATIIHCDEFRGLFPKTTKIKCLSDAGLFLDSTDVSGGRTLRNLYSGVVGLQGAQKNLPQICTNHLDPTSCFFPQNLIASVKTPLFILNAAYDSWQIQSSLAPPSADPSGYWHECRLNHAKCTRTQIQFLQGFRNHMLNAIKDFSRSKQNGLFINSCFSHCQTERQDTWFADDSPEIGNKAIAVAVGDWYFDRAGVKAIDCPYPCDNTCHHLVFR* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03859 417 Pfam Pectinacetylesterase 51 396 IPR004963 GO:0016787
Rops8g03859 417 PANTHER NOTUM-RELATED 43 413 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03859 Rops-Chr8 79427869 79432583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03859 53 417 Carbohydrate Esterase AT1G57590 75.342 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03859 K19882 - gmx:100782401 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03859 8 79427869 79432583 Rops6g02011 6 37944273 37949454 ECH
Rops8g03859 8 79427869 79432583 Rops8g03859 8 79427869 79432583 ECH
Rops6g02011 6 37944273 37949454 Rops8g03859 8 79427869 79432583 ECH
Rops2g05064 2 90802624 90810157 Rops8g03859 8 79427869 79432583 ECH
Rops8g03859 8 79427869 79432583 Rops6g01989 6 37735134 37739906 PCT