Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03838 ATGAAGCTGATTCTGATAGTGTTTGCGTTTGTTTCCGTGGTTTTCGCCGCCAGATCTGAGAGACATTCTCTGTCTACGCTGTCTTTGTTGGAAAACGATGTCGTTTCAGTTCCGGTGGCAGCAAAGCGTTCCTCTTCGCCACAACCTCAACCTCTCATGGTTCCCCTCACTCTTATTCAAGGAGCTGCTTCTAAAGGAGCTGTCTGTTTGGATGGAACGTTGCCTGGTTACCACTTTCATCCTGGATCTGGATCTGGTGCAAACAGTTGGCTCATTGAATTGGAGGGAGGAGGATGGTGTAACACCATCAGAAGTTGTGTCTTTAGAAAAACTACTCGCCGTGGTTCCTCAAAATTCATGGAAAAGCAATTACCATTCACGGGGATATTGAGCAATAAAGCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTCAAAGTACGGTACTGTGATGGAGCATCTTTTAGTGGAGATAGTCAAAATGAGGCTGCACAGCTTCAATTTAGAGGACAAAAAATATGGCTAGCTGCAATGGAGGAATTAATGTCCAATGGAATGCGGAACGCCAACCAGGCTCTTTTGTCTGGATGCTCTGCGGGTGGTTTGGCATCTATTATACATTGTGATGAGTTCTGGAGCTTGTTTCCAAAATCTACTAGAGTGAAATGTTTGAGTGATGCAGGGTTTTTCCTTGATGCAATTGATGTATCTGGGGGGCATACACTGAGGAATCTGTTTGGAGGTGTAGTTAACTTACAGGAAGTGCAAAAAAATCTTCCAAAAAGTTGTCTCAACCAACTAGACCCAACTTCGTGCTTCTTTCCTCAAAATTTGATCAACCATATTGAGACTCCATTGTTTCTGCTGAATGCAGCTTATGATGTTTGGCAGCTCCATGAAAGTTTAGCCCCACCTTCAGCAGATCCCCATGGCTCTTGGAATGATTGTAAATCAAATCACGCAAAGTGTAACTCATCTCAAATTCAGTTACTCCAAGACTTCAGAAATCAAATGCTAAATGATGTAAAAGACTTCTCAAGGACATCTCCAACCGGATTGTTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAGGATACATGGTTTGCTGATGACTCTCCGCTTATTAACAACATGCCAATTGCAATTGCTGTTGGAAACTGGTATTTTGATCGGCAAGCTGTCAAGGCTATTGACTGTGCTTACCCCTGTGACAATACCTGCCATAATTTGGTCTTCAATGTTGGTAGATCTGCCATGGTGGATTCTCAGTCCACAAGTGATGATAGTGACACATCTACCATGATATATTCTGGGTCCACGAGGTTGACTTTTAGTACTGGTCTATTCATGATAAGTGCTTTATTGCCAATTACATGCTCCTAG 1395 0.4265 MKLILIVFAFVSVVFAARSERHSLSTLSLLENDVVSVPVAAKRSSSPQPQPLMVPLTLIQGAASKGAVCLDGTLPGYHFHPGSGSGANSWLIELEGGGWCNTIRSCVFRKTTRRGSSKFMEKQLPFTGILSNKAEENPDFFNWNRVKVRYCDGASFSGDSQNEAAQLQFRGQKIWLAAMEELMSNGMRNANQALLSGCSAGGLASIIHCDEFWSLFPKSTRVKCLSDAGFFLDAIDVSGGHTLRNLFGGVVNLQEVQKNLPKSCLNQLDPTSCFFPQNLINHIETPLFLLNAAYDVWQLHESLAPPSADPHGSWNDCKSNHAKCNSSQIQLLQDFRNQMLNDVKDFSRTSPTGLFINSCFAHCQSERQDTWFADDSPLINNMPIAIAVGNWYFDRQAVKAIDCAYPCDNTCHNLVFNVGRSAMVDSQSTSDDSDTSTMIYSGSTRLTFSTGLFMISALLPITCS* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03838 464 PANTHER NOTUM-RELATED 32 413 IPR004963 GO:0016787
Rops8g03838 464 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03838 Rops-Chr8 79182109 79188064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03838 53 416 Carbohydrate Esterase AT1G57590 73.626 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03838 K19882 - gmx:100785270 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03838 8 79182109 79188064 Rops6g02011 6 37944273 37949454 PCT