Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03821 ATGTCTGTGATGAGAACAAAACGAGGCCTAGTTAAACCAGCCAAGAAGACTCCATTGACCACACTAGACCTATCAGTCATCGATAGATTACCTGTTCTAAGATGCAATGCTAGAACCTTACACGTGTTCAGACATGGCCCTGAAGCAGCAAGGGTCATAAGAGAAGCCCTGTCCCAAGCACTGGTTCCCTATTACCCTCTTGCAGGACGACTCATAGAATCCAAACCAGGGTGCCTCCAAATTGAATGCTTAGGCGATGGCGCATGGTATGTTGAAGCATCAGCTGATTGCACCCTTGAGTCCCACAATTTCTTTGATGACGTTGAGTCTATTCCATATGATGATCTTCTTCCTGATGATATTCATGAAACCGAAAAAATTCACCCCCTTGTGCAAATGCAGGTAACACAATTTGGTTGTGGGGGTTATGTGATAGGCCTCATATTTTGCCATAGCATATGTGATGGCCTTGGAGCTGCACAATTTCTAAATGCTGTTGGGGAGCTAGCTAGAGGTCTTGAGAAACCAAGCATTGAACCAGTGTGGCACAGGGACTTCTTTCCATCATCTCCTCAAATACCCCAGGAAGAAGCACTGCCAAAACTACCACCCACAGGTCCACCTCAAATGCCAGAGTACCAGTTACAACATGCTAACATAGACATGCCCATGGATCAAATCAAACTTCTGAAGAGAAAATTTCAACAAGTAACAGGACGCTTTTGTTCTGCCTTCGAGGTTGTAGCTGCAGCATTTTGGAGCAGCAGAACAAGAGCCATTAATTTCGAGCCCAACACACAAGTGAAGCTGGTTTTCTTTGCAAATTGTCGTCAACTCTTGGACCCTTCTCTACCCAATGGTTTCTACGGCAATTGTTTCTTCCCAGTAACAATGACGGCTTCATGTGAGTCACTTAGAGAGGCTTTGATCACTGATGTGGTGAAGCTGATCCAAGAAGCGAAGGCCAAGTTACCCTTGGAGTTTGGCAAGTACTTGAAGGGTGAGCATTTGAGAGGTGGTGAGGAGGACCCGTTTGCTCCTCCACTAACCTACACCACGCTGTTCATATCTGAGTGGGGGAGGTTGGGATTCAACCAGGTGGATTACCAGTGGGGTCCACCTGTCCACGTGGTCCCCATTCAAGGGTCCAGCATCATACCAGTGGGGATTGTGGGGTCACTGCCTCTCCCAAATAAAGGGATTCGTTTGATGACATGGTGTGTGGAAGAGGCCCATCGAGTTCCCTTCCTTGATCACATGCATGGTGTCATGCCATGGATCACCAACTGTTATGAGGCAGATTCTAAATAA 1311 0.4683 MSVMRTKRGLVKPAKKTPLTTLDLSVIDRLPVLRCNARTLHVFRHGPEAARVIREALSQALVPYYPLAGRLIESKPGCLQIECLGDGAWYVEASADCTLESHNFFDDVESIPYDDLLPDDIHETEKIHPLVQMQVTQFGCGGYVIGLIFCHSICDGLGAAQFLNAVGELARGLEKPSIEPVWHRDFFPSSPQIPQEEALPKLPPTGPPQMPEYQLQHANIDMPMDQIKLLKRKFQQVTGRFCSAFEVVAAAFWSSRTRAINFEPNTQVKLVFFANCRQLLDPSLPNGFYGNCFFPVTMTASCESLREALITDVVKLIQEAKAKLPLEFGKYLKGEHLRGGEEDPFAPPLTYTTLFISEWGRLGFNQVDYQWGPPVHVVPIQGSSIIPVGIVGSLPLPNKGIRLMTWCVEEAHRVPFLDHMHGVMPWITNCYEADSK* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03821 436 Pfam Transferase family 2 380 - -
Rops8g03821 436 Gene3D - 202 416 IPR023213 -
Rops8g03821 436 Gene3D - 1 198 IPR023213 -
Rops8g03821 436 PANTHER ACYL TRANSFERASE 4 2 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03821 Rops-Chr8 78885921 78887552 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03821 1 386 Monolignol Biosynthesis Gene Families AT5G48930 27.725 2.17e-35 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03821 - - gmx:100783128 689.108