Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03805 ATGGAGAGATCGAGGCGGGGGTCGAGGACGACGAGAGGAGGGATGACGAGGGAGCGTTGTGGGTTCCCGGAGCCTCGTGTTCGTTGTTATACGAGGTCTATCATCGAGGGTCTCAAACATGTTCATCAAAACGGGTTCGTTCACTGCGACATAAAGCTACAAAACATCCTCGTATTCGATGATGAGGAAATCAAAATCGTTGATTTTGGTCTTGCTAAGGAAACAAGGGTGAAACAGAGTAAGAGTGAGAAATTTGAATGCAGGGGAACTCCTCTGTTTATGTCGCCGGAATCGGTGAACGACGGCGAGCATGAGTCGCCGGCTAATATATGGGCTCTTGGGTGTGCGGTGGTGGAGATGATTACCGGAAAACCAGCATGGAATATGGAAAAAGGATCAAGTATGTGGTCCTTGTTGCTTCGAATTGGGGTGGGAGAAGAATTGCCGGAAATACCAGAGGAAATTTCAGAAGAGGGAAAGGATTTTCTTGAGAAGTGTTTCGTTAAGCATCCAAGAAAGCGATGGACTGCAGAGATGCTTTTGAATCACCCTTTTGTTGCTGCTGAATCACCAGAATGA 579 0.4732 MERSRRGSRTTRGGMTRERCGFPEPRVRCYTRSIIEGLKHVHQNGFVHCDIKLQNILVFDDEEIKIVDFGLAKETRVKQSKSEKFECRGTPLFMSPESVNDGEHESPANIWALGCAVVEMITGKPAWNMEKGSSMWSLLLRIGVGEELPEIPEEISEEGKDFLEKCFVKHPRKRWTAEMLLNHPFVAAESPE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03805 192 Gene3D Transferase(Phosphotransferase) domain 1 10 191 - -
Rops8g03805 192 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Rops8g03805 192 ProSiteProfiles Protein kinase domain profile. 1 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03805 192 SUPERFAMILY Protein kinase-like (PK-like) 19 187 IPR011009 -
Rops8g03805 192 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 21 187 - -
Rops8g03805 192 Pfam Protein kinase domain 17 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03805 192 SMART serkin_6 3 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03805 Rops-Chr8 78695652 78696230 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03805 21 189 MAP Kinase Kinase Kinase AT5G67080 60.355 2.52e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Rops8g03805 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03805 - - aip:107641670 261.922