Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03771 ATGGATGCGAAGGATATACTTGGATTACCCAAAAACTCATTCCCAGCCGTAGAGAAAAAATCTCGACCTCCCAAAGAATCTCAGAGAAAACCAGATGGCATTTCGCGCGAGGTTTATGCACTCACTGGTGGAGTGCCACCTCTTATGCCTTCAATTGATGCCTCTCAGTTGAAGAAAAAACCTCCTCCTGACGAAAAGATTACTTGGCAATGGCTTCCTTTCACCAATTCTGCTCGTAAAGATAATCTTCACCTTTACCACTGGGTTCGAGTCGTCAATGGTGTTCCACCTACGGGGGACTATTCTTTTGCCAAGTATAATAAGTCTGTTGACATCATCAAATACACGGATGAGGAGTATGACAAGTATTTGACAGATCCTATGTGGACCAAAGAGGAGACAGATGAACTATTTGACTTGTGCGAGAAGTTCGATCTCCGATTTGTTGTAATAGCTGACAGGTTCCCATCATCTCGGACTGTAGAGGAATTAAAGGATAGATATTATAGTGTATCGCGGGCTATATTAATTGCTAGGGCTCCATCTTCTGGGGACGTTGCAACACATCCTCTCATAAAGGAACCATATAATGTTTCACAAGAAATGGAGCGAAAACGAGCACTGTCCATGGTCCTCTCTCAAACAAGGCAACAAGAGCGAAGGGATGAAGAGGTTCTCATTGAAGCAAAAAGAATAGCTGAGTTACGCATGCCTTCTAAGGTTGCCGAAGAGTCTCAGTTGGTTGTTGCTTCAAATGCTGGTGCAGAAGGTACAGAGAGGGCTGTCCCCGGTGAAAATGTTTCTCCATTGAACGTGCAACTTCAATCAATGGTTGTGCCTTCCACATTAACGGATAATGCATCTACTCTAGCTTCTCTTCGCATGCTTCGTGTATATCTGAGAACATATGGACTTGAGCAAATGGTGCAAGCTGCAAACTCATCTGCTGGACTTCGGACTATCAAACGAGTTGAGCAAACTTTGCAAGATCTTGGGGTCAGTTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAAAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCTGAAGGCTCATCTTATCGTGATGGTTCATACGGTGAAACACCAGGCACACCAAAGGATCGGACATTTATTCCCGAATCCATGAATTTTGGAGGAGAAAGGGTTGGCAAAAAGGACCATAAGCGCAAGGGACCTGGAGGTCCATCGTCAGCAGCTCATAAAAGACCTAGAAAACAAAAGGCCTCAGATCTTTAG 1302 0.4393 MDAKDILGLPKNSFPAVEKKSRPPKESQRKPDGISREVYALTGGVPPLMPSIDASQLKKKPPPDEKITWQWLPFTNSARKDNLHLYHWVRVVNGVPPTGDYSFAKYNKSVDIIKYTDEEYDKYLTDPMWTKEETDELFDLCEKFDLRFVVIADRFPSSRTVEELKDRYYSVSRAILIARAPSSGDVATHPLIKEPYNVSQEMERKRALSMVLSQTRQQERRDEEVLIEAKRIAELRMPSKVAEESQLVVASNAGAEGTERAVPGENVSPLNVQLQSMVVPSTLTDNASTLASLRMLRVYLRTYGLEQMVQAANSSAGLRTIKRVEQTLQDLGVSLKPRVPTKAVCAEHLELRKEILTWLNLQKQVQYKEAEGSSYRDGSYGETPGTPKDRTFIPESMNFGGERVGKKDHKRKGPGGPSSAAHKRPRKQKASDL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03771 433 SMART sant 125 174 IPR001005 -
Rops8g03771 433 MobiDBLite consensus disorder prediction 1 36 - -
Rops8g03771 433 MobiDBLite consensus disorder prediction 401 415 - -
Rops8g03771 433 CDD SANT_DMAP1_like 129 171 - -
Rops8g03771 433 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 424 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Rops8g03771 433 SUPERFAMILY Homeodomain-like 125 174 IPR009057 -
Rops8g03771 433 Gene3D - 98 184 - -
Rops8g03771 433 FunFam DNA methyltransferase 1-associated protein 1 97 184 - -
Rops8g03771 433 Pfam SANT/Myb-like domain of DAMP1 101 175 IPR032563 -
Rops8g03771 433 MobiDBLite consensus disorder prediction 18 33 - -
Rops8g03771 433 MobiDBLite consensus disorder prediction 370 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03771 Rops-Chr8 78205547 78214228 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Rops8g03771 SANT_DAMP1_like 1.3e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03771 K11324 - gmx:100818926 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03771 8 78205547 78214228 Rops8g03771 8 78205547 78214228 ECH