Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03758 ATGGAGAAGAAGGAGGTGATGACTATGAAGATGGAGGGTGCGATTGGATCTTCATCTTTCCCAAGCATGTTTGATTTCTCAGAAGAAAAGAGCTCTTTAGGGTTTATGGAGTCATTGGGTGTGCAAGACTATAGTCCTCTGCTTGATTTGCCTCATCTGTCAAACATGCCTGTGGCTCATACCTCTGCTCTCAAGGATCCACCTTTGAAAGAGTGTTCCGAGTTGTTGAACCAGCAACCTGCAACGCCAAACTCTTCATCCATTTCATCTGTGTCCAGTGAGGCACTCAATGATGAACAGAATAAAATTGTAGACCAAGCAAATGAACCACAAAAAAAGTTGAACTTGAAGCCTAAGAAGACAAATCAGAAGAGACAGAGAGAACCTAGATTTGCGTTCATGACGAAAAGCGAGGTCGATCAATTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTGAAAAACAGCCCCTTTCCAAGGAGCTATTATCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGTGTGGAGCGATCTTTCACTGATCCAAGCATTGTAGTGACAACCTACGAAGGGCAGCACACACATCCTAGTCCAGTTATGTCTCGTTCAGGCCACATCGGATCTCCAACACCATATGCCACCAACTTTGGTTCAGTAATGTCTGGAAACTTCATGTCCCAATATTATCAGCACAATCAACAAGTCCTCTTCAATACATTGTCTTCTTTGGGTTTTCCTTCAAAGAATGCCACTTTTCCTCAAGAGAGACAGCTTTGTAATCAAGGGGATACTGCATTGCTAAAGGATAATGGGCTTCTTCAAGATGTTGTTCCTTCACATATGTTGAAGGAAGAGTAG 870 0.4299 MEKKEVMTMKMEGAIGSSSFPSMFDFSEEKSSLGFMESLGVQDYSPLLDLPHLSNMPVAHTSALKDPPLKECSELLNQQPATPNSSSISSVSSEALNDEQNKIVDQANEPQKKLNLKPKKTNQKRQREPRFAFMTKSEVDQLEDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSIVVTTYEGQHTHPSPVMSRSGHIGSPTPYATNFGSVMSGNFMSQYYQHNQQVLFNTLSSLGFPSKNATFPQERQLCNQGDTALLKDNGLLQDVVPSHMLKEE* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03758 289 FunFam WRKY transcription factor 57 128 202 - -
Rops8g03758 289 Gene3D WRKY domain 127 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03758 289 MobiDBLite consensus disorder prediction 77 108 - -
Rops8g03758 289 SUPERFAMILY WRKY DNA-binding domain 134 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03758 289 Pfam WRKY DNA -binding domain 143 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03758 289 PIRSF WRKY_txn_fact_IIc 1 289 IPR017396 GO:0003700
Rops8g03758 289 MobiDBLite consensus disorder prediction 77 127 - -
Rops8g03758 289 MobiDBLite consensus disorder prediction 112 127 - -
Rops8g03758 289 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 229 IPR044810 GO:0003700
Rops8g03758 289 SMART WRKY_cls 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03758 289 ProSiteProfiles WRKY domain profile. 137 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03758 Rops-Chr8 78125150 78126954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03758 22 289 WRKY Transcription Factor Family AT2G47260 47.678 2.03e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops8g03758 WRKY 8e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03758 - - aprc:113872234 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03758 8 78125150 78126954 Rops8g03758 8 78125150 78126954 ECH
Rops8g03758 8 78125150 78126954 Rops6g02064 6 38739192 38741130 PCT