Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03754 ATGCCAATCGATATATTGAAAAAGGTTCAAGGCTTGTTGCTGAAATGGATGCTTATATTATCTTGCCTGGTATTTATGATAGAATCTGGTGTAAATGATAAAACACTAGAATCCCCATCGAAATCTGCAGCAAGATCACCTTTGGCCACTGATGTTGTTCGTGATCTGCCTCTACCAGCAAATCTCCATGGGCTTTCTCCTGGTACCCCAATTGCAACATTGTCACCAGTCAATCCTCCTTCCTATGGTCCTTTCATAAATACCGGTCAACCCCCTAAAAGTTCACATTTATCCATACCATCCAAGAAGAGGACTGAATGGAAGCCTCCAATTTCTGGCTCTAAAAATATTGCTCCCATTCATTCTACCGCAGCTGCCGTCCCTTCTGCTTTGGCTCAGCCACCGTTGTCTCCTTCTGTCTCTAATTGTTGCCAACAAGACATGGTGTTGAAACGAGGCAGTAAGAGTTGCCACTGTGTGTATCCCATAAAGCTAGACCTTCTTCTTTTGAATGTCTCTCAAAATCCAAATTGGAATGTTTTTCTTGATGAATTAGCTACCCAGCTTGGGTTGCAAAATACCCAGATTGAACTGATAAACTTTTATGTACTCAACGTATCAACATTAAATATATCAATGAATATTACTCCACATAAAGGCATCAGTTTCTCTGCCAATGAAGCTTCTAAAATAAACTCTTCACTCTCAATGCATAAGGTTCAACTAGACCCTGGATTAGTAGGTGGATACAAACTTCTCAATATAATATGGTTTGAACCTCCACCTCCTTCTGAAGCTCCTGGTTTAGCTTCATCACCTGTGAAAGCACCTTTGTATCATTCACCTACTGCTACATCATCAAGTTCTTCAAATAGGGGAAGGCATTCAAATCTATTTCTTATTCTTGGAATCACTATTGGCATACTCTTCATTGCTATTGTATCTGTACTTATATTCTGTTTATGTACAATGCTGCCAAAGGAAAAAACACCTCCCTTAGAAACCGAAAAGCCAAGGACGGAAAGTGCTGCTGCAGCTGTGGGTTCTATTCCCCACCCAACCAGTACACGATTTATTGCTTATGAAGAACTCAAAGAAGCAACCAACAATTTTGAACCAGCAAGTATACTTGGAGAAGGAGGGTTTGGTAAAGTTTTTAAAGGTGTCTTAAATGATGGTACTTCTGTAGCAATTAAGAGGCTCACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGTTGAGGTTGAAATGCTAAGCCGGTTGCATCATCGTAACCTTGTAAAATTAGTGGGATACTATACTAGTCGTGACTCGTCACAAAATCTACTTTGCTATGAGCTTGTCCCCAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCTTGGGAATAAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCTCTTGATGCTGCAAGAGGACTTTCATACCTGCATGAAGACTCACAACCCTGTGTAATACACAGAGATTTCAAGGCATCCAACATATTGCTTGAGAACAACTTTCATGCTAAGGTTGCAGATTTTGGTCTTGCTAAACAGGCACCTGAAGGCAGATCTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGACACCTACTTGTTAAAAGTGATGTTTATAGCTATGGGGTTGTCTTGCTAGAACTGCTTACTGGAAGGAAACCTGTGGATATGTCCCAGCCAGCTGGACAAGAGAACCTTGTTACTTGGGCTAGGCCAATTCTTAGAGATAAGGACCGGTTGGAAGAAATTGCTGATCCAAGACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTACGTGTGTGCACTATTGCTGCAGCATGTGTTGCTCCTGAAGCAAGCCAGCGACCCACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCATGATTCTGTGTTACCCTCGTCCAATACAAGGCCCAACCTGAGACAGTCCTCTAGCACTTTTGAGTTTGACGGAACATCTTCAGTGTTCTCTTCAGGTCCTTACTCTGGCCTGAGTGCTACCTTTGACAATGACAACATTTCTAGGACGGTGGTTTTCTCTGAAGATCTTCATGAAGGCCGGTGA 2151 0.4226 MPIDILKKVQGLLLKWMLILSCLVFMIESGVNDKTLESPSKSAARSPLATDVVRDLPLPANLHGLSPGTPIATLSPVNPPSYGPFINTGQPPKSSHLSIPSKKRTEWKPPISGSKNIAPIHSTAAAVPSALAQPPLSPSVSNCCQQDMVLKRGSKSCHCVYPIKLDLLLLNVSQNPNWNVFLDELATQLGLQNTQIELINFYVLNVSTLNISMNITPHKGISFSANEASKINSSLSMHKVQLDPGLVGGYKLLNIIWFEPPPPSEAPGLASSPVKAPLYHSPTATSSSSSNRGRHSNLFLILGITIGILFIAIVSVLIFCLCTMLPKEKTPPLETEKPRTESAAAAVGSIPHPTSTRFIAYEELKEATNNFEPASILGEGGFGKVFKGVLNDGTSVAIKRLTNGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYTSRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRSNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPAGQENLVTWARPILRDKDRLEEIADPRLGGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVVQSLKMVQRITEYHDSVLPSSNTRPNLRQSSSTFEFDGTSSVFSSGPYSGLSATFDNDNISRTVVFSEDLHEGR* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03754 716 MobiDBLite consensus disorder prediction 82 98 - -
Rops8g03754 716 ProSiteProfiles Protein kinase domain profile. 371 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03754 716 Gene3D Transferase(Phosphotransferase) domain 1 449 664 - -
Rops8g03754 716 Gene3D Phosphorylase Kinase; domain 1 335 448 - -
Rops8g03754 716 FunFam Receptor-like serine/threonine-protein kinase ALE2 351 448 - -
Rops8g03754 716 CDD STKc_IRAK 377 647 - -
Rops8g03754 716 FunFam Receptor-like serine/threonine-protein kinase ALE2 449 664 - -
Rops8g03754 716 PANTHER OS01G0750732 PROTEIN 139 662 - -
Rops8g03754 716 MobiDBLite consensus disorder prediction 82 112 - -
Rops8g03754 716 SUPERFAMILY Protein kinase-like (PK-like) 350 648 IPR011009 -
Rops8g03754 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Rops8g03754 716 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Rops8g03754 716 Pfam Protein tyrosine and serine/threonine kinase 375 646 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03754 Rops-Chr8 77975678 77984267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03754 12 716 Receptor kinase-like Gene Family AT4G02010 69.014 0.0 983
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Rops8g03754 PK_Tyr_Ser-Thr 3.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03754 - - gmx:100793528 1202.96