Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03750 ATGAAAACTCCATATCTCAGATCAAGCTTACAGCAAGAGACTGAAAAGAGGTACAAAGCTATGGACAGTAACTCCTCCCCCCAACTTGATTCTGAAGCATCTTCAGAATTCAAAGCAGAAACTCAAGCATGCAAGAAACGGAAAATGATTGAGAAAACAGTTGTGGCTGTGAGGATAGGAGAGAATGTGAGCAAGCTGAAGAATGAAGGACTACCTTCTGATTTTTGGTCTTGGAGGAAATATGGACAGAAGCCAATTAAGGGGTCTCCATATCCAAGGGGCTATTATAGGTGCAGCACATCCAAGGGCTGTTCAGCCAAAAAACAAGTAGAAAGATGCAGAACAGATGCTTCAATGCTGATCATCACCTATACCTCTACCCATAACCATCCAGGTCCTGATACCCTCTCCACCACAGATTCAACCCAACAACCAAAAGAATCAGAAACTGAAACCACTGAAGACCTCCCAGCTACTTCAACGGAAGAAGACCAAGGACATATAGAAGAGGAAATGAATAATAATAAGCACACCATGACTAGTGATCAAGGTACAAATGAAGAAAATTTTCATTACTTGCAATCTCCAATACACTGCTCTGAGGACATTATTATAGACCAAGAAGATCCTTTCAAACTAAACACTGAAAAAAGCCATGACAGAATAGATCTCCTCTTAGAGGAAGAGCCCCTGTTTTATGCAGAGTTAAAGAACTTGTCACCATCCAAATCAGAAGAACTTGACTTTTTCGATGAGCTTGAGGAGCTACCCATGTCTTCATCCTTCTTACACTTCACGAAAAGCATTTTTTCCGATGAAAGGATTCCTGTTGCCCCTTCTTGA 843 0.4116 MKTPYLRSSLQQETEKRYKAMDSNSSPQLDSEASSEFKAETQACKKRKMIEKTVVAVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPGPDTLSTTDSTQQPKESETETTEDLPATSTEEDQGHIEEEMNNNKHTMTSDQGTNEENFHYLQSPIHCSEDIIIDQEDPFKLNTEKSHDRIDLLLEEEPLFYAELKNLSPSKSEELDFFDELEELPMSSSFLHFTKSIFSDERIPVAPS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03750 280 MobiDBLite consensus disorder prediction 1 37 - -
Rops8g03750 280 Pfam WRKY DNA -binding domain 74 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03750 280 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 261 IPR044810 GO:0003700
Rops8g03750 280 MobiDBLite consensus disorder prediction 21 37 - -
Rops8g03750 280 ProSiteProfiles WRKY domain profile. 67 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03750 280 FunFam WRKY transcription factor 65 56 133 - -
Rops8g03750 280 SUPERFAMILY WRKY DNA-binding domain 69 133 IPR036576 GO:0003700|GO:0006355|GO:0043565
Rops8g03750 280 SMART WRKY_cls 72 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Rops8g03750 280 MobiDBLite consensus disorder prediction 125 167 - -
Rops8g03750 280 MobiDBLite consensus disorder prediction 125 146 - -
Rops8g03750 280 Gene3D WRKY domain 58 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03750 Rops-Chr8 77932590 77934313 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03750 45 133 WRKY Transcription Factor Family AT2G34830 66.667 1.44e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Rops8g03750 WRKY 2.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03750 - - gmx:100127368 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03750 8 77932590 77934313 Rops8g03750 8 77932590 77934313 ECH