Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03748 ATGGGGAGTGACCATTTTTCTTTCACAGCTTTGAATTTCAACAGGATCCAGGTGGATTATGGCTCTGTAGAAGAGGTTGTGTTACAAGGGAAACACAGTTATTTTGGAATGGAATTGCTTGAAGAGATTAATCCTCTCCCTGATGGAAAAGGAGGCAATATGTTCAAATATCAAAATCAACAGCAGCAACAAGAACTTGAAGTTGATAACTTGATGTTAGAAGAGGTCAACTTTGACCCTTATCTGCAACCAACACAACCATTTCAAGAAACTATAAAACTAAACAATCAGGGAGTGGCAAGTTCAGAACCAGTGCCACCATGTTTAGCATCCTTAGAGCTCCTGAGAAATTACGGAAGCAAGTTCAAGATGCAAAGTGAGCAAAATACAAGCAACTTAAACAATATTGAAACTTCTGTGGATCACAAGAAGATGTCAACTGAAGAAATAATAAGAGTGGCTGGAGCAAGGTATGTCCAATACTCTATCCATTGGAATGATAGTTTTGCCATTCCTAAGCACCCTTATGGATTGGATCTTGGGGGTTTGTCTGAGGAAGAAAATAGAGACGTTGAACTTGCTCAGTATCTCCTTGCTGCAGCTGAAAGAATTGGCTGCCAACAATTTAAACGTGCCAGCAAGTTACTTGCCCGTTGTCAATGGATTTCATCTGCCACTGGAAACACTGTTCAAAGAGTTGTCTTTCATTTTGCTCGAGCACTGCAAGAGAGAATAGACAAAGAAACAGGAAGGATGAGACATAAGGGATTAGAGAAAAATGAAGAAAGGGAATTACTTCAGAAGATGGATACCAACAAATCCCTTCTATGTCATCAAAAAATTCCTTTCAACCAAATACTACAATTCACTGGGATACAAGCTATAGTGGAACATGTTGCATCTGAGACCAAAATTCACCTAATAGATCTTGATATAAGAAGTGGGGTGCAGTACACAGGTTTGATGCAAGCATTGGCTGAGCGCCAGGATTGTCCAATAGAGATTTTGAAGATAACTGCCATTGGAGTTGATGCATGCAAAACCAAGATAGAAGAGACTGGAAAAAGGTTAGAGAGTTTTGCTGAATCTTTGAACTTGCCCTTTTCATATAAGGCTGTTTTAGTCAAAGAAATGGCAGAAATTAAGTTAGATCATTTTAAAGTTGAAGAGGATGAAGCTGTGGCTGTTTACTCTCCATATTGTCTAAGGAACATGATATCAAGGCCTGATTGTATGGAAAACTTGATGAGGATTATAAGAAATGTCAAACCATCTATAATGATAGTCCTTGAAGTGGAAGCAAACCATAATTCACCCTCCTTTGTGAATCGATTCATTGAAGCATTGTTCTTCTACTCGGCTTATTTTGATATCCTTGAGACCTGCATAAAAGAGGAGGATGAGTGTAGAATGATAACAGAAGCAATATTATCTGCAGGGATAAGAAACATTGTTGCCATGGAAGGAAGGGAAAGGACAGTTAGGAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAAGTTGGATTTAGTGAGTCATCTCTGTACCAAGCTGAGTTGGTTGCCAAAGAGTTCCCTTGTGGGAAATTCTGTACTATAGATAAGAATGGGAAGTGTTTGATAGTGGGATGGAAGGGGACCCCAACGCATTCAATCTCAGCTTGGAAGTTTCTTTGA 1695 0.3923 MGSDHFSFTALNFNRIQVDYGSVEEVVLQGKHSYFGMELLEEINPLPDGKGGNMFKYQNQQQQQELEVDNLMLEEVNFDPYLQPTQPFQETIKLNNQGVASSEPVPPCLASLELLRNYGSKFKMQSEQNTSNLNNIETSVDHKKMSTEEIIRVAGARYVQYSIHWNDSFAIPKHPYGLDLGGLSEEENRDVELAQYLLAAAERIGCQQFKRASKLLARCQWISSATGNTVQRVVFHFARALQERIDKETGRMRHKGLEKNEERELLQKMDTNKSLLCHQKIPFNQILQFTGIQAIVEHVASETKIHLIDLDIRSGVQYTGLMQALAERQDCPIEILKITAIGVDACKTKIEETGKRLESFAESLNLPFSYKAVLVKEMAEIKLDHFKVEEDEAVAVYSPYCLRNMISRPDCMENLMRIIRNVKPSIMIVLEVEANHNSPSFVNRFIEALFFYSAYFDILETCIKEEDECRMITEAILSAGIRNIVAMEGRERTVRNVKIDVWRRFFARYRMVEVGFSESSLYQAELVAKEFPCGKFCTIDKNGKCLIVGWKGTPTHSISAWKFL* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03748 564 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 551 IPR005202 -
Rops8g03748 564 Pfam GRAS domain family 194 562 IPR005202 -
Rops8g03748 564 Coils Coil 54 74 - -
Rops8g03748 564 ProSiteProfiles GRAS family profile. 184 562 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03748 Rops-Chr8 77910533 77912227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03748 183 563 GRAS Transcription Factor Family AT3G03450 29.563 4.05e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops8g03748 GRAS 1.6e-86 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03748 - - gmx:100791952 813.913
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03748 8 77910533 77912227 Rops8g03748 8 77910533 77912227 ECH