Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03746 ATGTCATCCCCAACCATCAGCTCTGCCACCGAACCTCGAGAACAACATGGAGAGGCGGCAAAAGATGGCGACACCTTGTTCGGGAAGTTAACGCAGTTGCAAAAGGAAATCCAGGAGGAGCGAATTGAACCAATTAAAGAAAAACTTCAGAGGAATGTAAAGAATCTACAAAGTCAGGTTTCAGCAGTCTTGTTAGAAATATCAGGAAGGGACTCACTACAGACTCAGCAAAGTACCATTCCAATGCTTTCTTCAAGAATTAGCCATCCTTTATGTAAGTTTAGTAGTTTCTCTCAAGGTTTGGGAGAGAAGGACCACATCAACAATCAAGACGAATTGCCTGTACGAAGTATCAAGATTCCATACATTGAAAGATTACCACCATTTACATGTTGGATACATTTGGCCAGAAATCAGAAAATGGCTGAAGATCAGTCAGTTATTGGAAGAAGACAAATATACTATGATCAACGTGGAGGTGAGACACTGATAAGCAGTGACAGTGATGACGAGTTAAAAGAACCCGTGGAAGTTAAACATTACTTTTCTCAGGGTGAAGACCGAGTTCTGTGGATGGCATTTGAGGAATATGGGTTAACTGAGGAGGTGTTGAGTACTGTTAAGATGTTTATTGGGGGTACCAGTTCAGAAATTCAGGATAGGTATAAAAATCTCAAGGAAAAGAACATGAAGAAGCTGGATCAGCGTTCTGAAGATTCTGGAGAATTTGAATCTCGTACTGGCATATGTTTGGAGAAAAGCATGAGTGCTGCTTTAGATACTTTTGATCACCTTTTTTGTCGCCAGTGCATACAGATCTTCGACTGTCCTCTGCATGGCTGTTCTCAACCTTTAATCTATCCAAGTGAAAAGCAGCAAGTTTGGTCTGAACCTGAAGGTGACAGGAAACCATGCGGTGATCAGTGTTACCTTCGGTTAAAGGATGTCAAGATTTTGTCAGAAATGTCAACTAAAGGGTCCTTTCAGGATAAAAATATTAAAACAATGGAAGAGGTAGATGGGATGTTGGCACCCTCTAGTTTAAAGGAGCCTGGTAATCAGAGCACTATCTTGCAGAAAGAAAGATGCAATTATGCGACAACACCTGTTACTTGTGATGAGTCTCAGAATTCTTGTAAAAAGCAGAAGAGAATCCCAGATCATATAGTTACCACTATTGGTGATTATTGCAGGGACATAGATTTGGATGCTTGTGATGAAGAAAAACACACAATTACTTGTGCATCTTCGAAAAGTTTTGCTGAACATACTTCAAATAAATTCATAGCTTCTGGTAGCACTTGCCATGATGAGCATGATAAGGGTGTTGGCGACGGACAAAAAGATGTCACAAATGAGATAGAATTTAAGAAGTTGTCCCCTTCAACGGAAGCGCAAGTTGATGAGATGCCCAGGGTCTCAGATTGGAAACCTCTGGAGAAAGAATTATATTTAAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTTGTATCCCGGAACTTACTTTCTGGCTTGAAGACTTGCATGGAAGTAGCTAGCTACATGTATGCTGGTGATGTGTCAATGTCCCAGAGATCCACACATTCAGCCATGGACAAAAATGGAAAAATTGGTGCAGAGTGCATGGACCAAGAGATGCCATCAAGGTCACGGTTGTTGCGGAAAAGGGGCAAAACTAAGAAGTTCAAATATTCTTCGAAGTCTGCTGGCCTCCCATCTATGTGGAGAAGAATTACTGATGGGAAAAACCAAACGTATAAGCAGTATACCCCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTCCTTGTCTTCAAAATGGATCTTGCTGTGAAAAATATTGTGGGTGTTGGAAGCTCTGCAGAAATCGGTTCAGAGGATGTCATTGTGCCAAAAGTCAATGCAGAAGTCGACAATGTCCATGCTATGCAGCAGGACGGGAATGTGACCCAGATGTCTGTCGAAATTGCTGGGTCAGTTGTGGCGGTGGTTCATTAGGGGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAAAAACAGAGGATTCTTTGGGCAAAGTCTGATATTGCAGGATGGGGAGCCTTCTTAAAGAACCCGGTCAACAAAAATGATTACCTAGGAGAGTACACGGGTGAACTGGTCTCTCAAATAGAAGCAGATAAACGTGGAAAGATATATGATCGTGTGAACTCCTCTTTCCTTTTTAACTTGAATGATCAGTATGTTCTTGATGCTTATCGCAAAGGAGACAAGTTGAAATTTGCGAACCACTCATCAAAACCTAACTGCTATGCTAGGGTGTTGTTTGTTGCCGGGGATCATCGAGTAGGCATATTTGCCAATGAACACATTGAAGCTGGTGAGGAGCTTTTCTATGATTATGGCTATCTTCCAGCTCATGCACCAGCATGGGCTCTTGGCTCTTTAACCGAGGGTTCCAAGAGAGACGAAACACCACTTTCTCATGGCAGAGCAAAGAAACACCAATCTCATTGA 2523 0.4217 MSSPTISSATEPREQHGEAAKDGDTLFGKLTQLQKEIQEERIEPIKEKLQRNVKNLQSQVSAVLLEISGRDSLQTQQSTIPMLSSRISHPLCKFSSFSQGLGEKDHINNQDELPVRSIKIPYIERLPPFTCWIHLARNQKMAEDQSVIGRRQIYYDQRGGETLISSDSDDELKEPVEVKHYFSQGEDRVLWMAFEEYGLTEEVLSTVKMFIGGTSSEIQDRYKNLKEKNMKKLDQRSEDSGEFESRTGICLEKSMSAALDTFDHLFCRQCIQIFDCPLHGCSQPLIYPSEKQQVWSEPEGDRKPCGDQCYLRLKDVKILSEMSTKGSFQDKNIKTMEEVDGMLAPSSLKEPGNQSTILQKERCNYATTPVTCDESQNSCKKQKRIPDHIVTTIGDYCRDIDLDACDEEKHTITCASSKSFAEHTSNKFIASGSTCHDEHDKGVGDGQKDVTNEIEFKKLSPSTEAQVDEMPRVSDWKPLEKELYLKGVEMFGRNSCLVSRNLLSGLKTCMEVASYMYAGDVSMSQRSTHSAMDKNGKIGAECMDQEMPSRSRLLRKRGKTKKFKYSSKSAGLPSMWRRITDGKNQTYKQYTPCGCQGMCGKQCPCLQNGSCCEKYCGCWKLCRNRFRGCHCAKSQCRSRQCPCYAAGRECDPDVCRNCWVSCGGGSLGEPPRRGDGQCGNMRLLLRQKQRILWAKSDIAGWGAFLKNPVNKNDYLGEYTGELVSQIEADKRGKIYDRVNSSFLFNLNDQYVLDAYRKGDKLKFANHSSKPNCYARVLFVAGDHRVGIFANEHIEAGEELFYDYGYLPAHAPAWALGSLTEGSKRDETPLSHGRAKKHQSH* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03746 840 ProSiteProfiles CXC domain profile. 576 675 IPR026489 -
Rops8g03746 840 Pfam CXC domain 628 659 IPR041355 -
Rops8g03746 840 SMART CXC_2 624 661 IPR033467 -
Rops8g03746 840 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 2 840 IPR025778 GO:0031519
Rops8g03746 840 ProSiteProfiles SET domain profile. 689 804 IPR001214 GO:0005515
Rops8g03746 840 FunFam Putative histone-lysine N-methyltransferase EZH2 590 806 - -
Rops8g03746 840 Pfam SET domain 700 804 IPR001214 GO:0005515
Rops8g03746 840 SUPERFAMILY SET domain 561 805 IPR046341 -
Rops8g03746 840 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 839 IPR045318 GO:0006338|GO:0042054
Rops8g03746 840 SMART set_7 689 810 IPR001214 GO:0005515
Rops8g03746 840 MobiDBLite consensus disorder prediction 1 26 - -
Rops8g03746 840 CDD SET_EZH 689 805 - -
Rops8g03746 840 Coils Coil 46 66 - -
Rops8g03746 840 Gene3D SET domain 590 806 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03746 Rops-Chr8 77891800 77904750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03746 685 808 C2H2 Transcription Factor Family AT2G23740 29.078 2.54e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Rops8g03746 SET 1.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03746 - K11430 gmx:100808730 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03746 8 77891800 77904750 Rops8g03746 8 77891800 77904750 ECH
Rops8g03746 8 77891800 77904750 Rops6g02075 6 38823903 38834095 PCT