Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03739 ATGAGTCTCTTCTCATCAATGGTTTTGAGGCCTTCATCTTTGATCATTCTGCTGGCATATGCCGCACTGATAGTTCTTATCGCATTGACTCCACGCTGGTATGTCATGGTTACACATATTGTGCAGCATGTGAAATTAGATTCAGAAAATATTCTCTCCCAATACCAATCCCAAATTGAGCATTCAGCTAGACTGATTCACCCTATGAATTCGTCCTCAACCAATTTTGCAAGATTTCTGAGTTCAACTCTCAAAGCTAGTGACATCTCATTCTCTGACATTGAGGCCAAGGTGGCTCCTTTATTATTTCAAGCACTGGAGACGGTTCCACACTTGGCCCAAATCTCATATATAGGGATGGAAGATCTCTTTTTCTCATACTACACTGATCATGATCAAGTTATGGCAATGTACTCAAACTCATCACCATCTTCAGCTTCTTTTTGGGGTGCCCCAAATACAACCATATACTATGTCCAGCATGTAAATCGTGACAATGGAAAGTTATATGGGGAAGCCAAAATAATATCTGAACCCTCTGTTGCTGCATGTTGGGTTGGAGAAACAGTTAACAGTTCATGTGGGTCTGCTTCATTAGCAACCAAGTGGAACAATGGTCATGAACTTCTATTCATTAGTTCAGCAAGAATCACAAGAACAGGAATGATCTCTCTTGGTTTTCCAGTAACATCAATAACTGGTTTCTTCACTCGTGTTGGTCATCAAGGTGTGAACTTGCATTTGGCTACCAGAGATGGAAAAGTGCTTGTAGAAGGGATCCCAGATACTCATGTGGTTATTTCTAATGATACGGTTTCCTTCCAATCAGTGAATGCAAATGATGATCAAACATGGTATGACGACACTGTCTCATGCAAAGATGGAGTTGTTACTTCTATTTTGAATATTCAGGGTATTGAGTTTTTAATTCGCTGCTCCTTCATTGATATAATGGGAATAGAATCGGTGTATGTTTTGGCTGTCCCACAAAATGGATTGGTCGGCTTTGCTCTGAACATAAAGAAAAATGGATTGACACTATTGAAAGTGATGATGGTCATGATATTCATTGCCATTGTCAGTTTTCTATTTATAAATAGTAGATCTGTTTGGCGAGAAATGCATTTGCGTAGGTCACTCATCAAACAAAAGGAAGCCACCCAAGAAGCTGAAAGAAAGAACGTAAACAAGAGCCTTGCTTTTGCTAGTGCCAGCCATGACGTTCGTGCTTCACTGGCAGGCCTTACTGGTTTGATAGAGATGTCCTTCCAGGAAGTTGTCCCTGGTTCTGAATTAGAGACCAACTTGAAACAAATGGATTCTTGTGCCAAAGATTTACTAGGACTCTTGAATTCTATACTCGATACAAGCAAAATTGAAGCAGGTAAAATGCAGCTTGAGGAAGAGGAATTTGATGTGTTCCAACTCCTAGAAGATGTAGTTGATTTATACCATCCTGTGGCTATGAAGAAAGGAGTAGATCTTGTTTTGGACCCTTGCAATGGCTCTTTGCTCAGATACTCTCGCACTGTAGGCGACAGAGGAAAACTCAAACAAGTTTTGTGCAATTTACTGAGCAATGCTGTTAAATTTACTGAACAGGGGCACATAGCAGTGAGAGCATGGGCTCAGAAGCCTAGCTTGCAGAACTCAATAATTGCTACTGACAACAGATACAGCTTAAGGAGACGTTTGTCATGCTTATTTTATAGGAAAAATGAAGCACGTGATGATATTGAAGACATGATTTCAATCCAACAAGATCCAAGTTGCATGGATTTTACGTTTGAAGTGGATGATACGGGCATAGGAATTCCTAAAGAGAAGTACAAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAAATGATTTTGGCCAAGGAGGAACTGGTTTAGGACTTGGTATTGTCCAATCATTGGTACGTTTGATGCATGGAGATATTGGAATTATGGAGAAGGATATTGGTGAAAAAGGAACTTGCTTTAGGTTCAATGTGCTACTCAATGTATGTGAATCAGGGACTGGTGGTGGCACAATTGAGGGTCTGTTTGGATCAAGTGACAGAAATGAAGCTCAGGGACCACCGACCATTTCTGGCACGAGCATTTGTTCCATGAGTCCCAAGTTACCTATTTGTAGTCCTAGACCCGAGTCTTCCACAGCAGTTATTTTGATTCAAGATGAGGAACGCCGAAGGACTACACAAAGGTTCATGGAGAGCTTAGGGATCCAAGTTAAGGTTGTGAAGGAGTGGAGACATTTGTGTCACACTCTCAACAAGATCCACCAACAAAAGGGTCTCTATTCTAATAGCCCAAGTTCCCCAGGGTCTTCAGATTTGAGTTCTTATGATAACTTTACTGGCAGAGCCAGAGGAGTTCCTTTGAGTCCCATGGATGGAATTGACTATATAAATTCAATCTTCAAGAAGACAGATATCGAAGCTAACCTGGGTTTCTTCCTCATTGTGATTGACGCACATGCAGGACCATTTTCAGAACTTTGCAGGATGGTATCTGAGTTCAAAAGAGGCCTTGGCAATGCTTATTGTAGGGTTGTTTGGTTAGAGAAGCCACTCATGCCTGGTGTTAATTTCAAGACCCTTGAAGAGCATGTTTCTGATTCAAACGACATTTTCTTACCAAAACCACTTCATGGTAGTCGTTTGTTCCAAGTTATAAGGCTTCTTCCAGAGTATGGTGGTACTTGGCAATGCAGTTCTAGTAAAGCAAACAGAGAAAGGACTCAAACTTCCCCAACTGATGAAAAGTATAGCAGTTCAAGCAGTTGGAAGGAAACTCAGCAATCCTTTGGATATCAATCTTGTGATGAAAAATCTCCGGTTCGTCAAGGAGAAAAACGAGAATGTGGAAACTCAAGCAATGACAAACCCTTAAGTGGTATGAAATTTTTGGTGGTTGAGGACAATGTAGTATCACGCAAGATAACTAAAGCTAAGTTGGAACGGCTTGGTATCTCTATGGAGGAATGTGTGAATGGTGAACAAGCTGTTCGGCTAGTCGGAGAGTGTCTAAGAAGGGGCTTTCCCAATTCTCCATATCATTGCATCTTAATGGACTGCCAGATGCCAGTAATGGATGGATACGAGGCAACAAGGCAGATAAGGGAGATGGAGAAGCCCTATGGTGTTCGAATTCCTATCATTGCATTAACTGCTAATACAGGGGAAGAAGCAAAAATGACTATTGAAGTTGGAATGGATGATCACTTGGTCAAACCCATCAACGAGGAGGTTTTACTTGAAGCCATCGGAAATATACATAGGAAAGAATGA 3297 0.4101 MSLFSSMVLRPSSLIILLAYAALIVLIALTPRWYVMVTHIVQHVKLDSENILSQYQSQIEHSARLIHPMNSSSTNFARFLSSTLKASDISFSDIEAKVAPLLFQALETVPHLAQISYIGMEDLFFSYYTDHDQVMAMYSNSSPSSASFWGAPNTTIYYVQHVNRDNGKLYGEAKIISEPSVAACWVGETVNSSCGSASLATKWNNGHELLFISSARITRTGMISLGFPVTSITGFFTRVGHQGVNLHLATRDGKVLVEGIPDTHVVISNDTVSFQSVNANDDQTWYDDTVSCKDGVVTSILNIQGIEFLIRCSFIDIMGIESVYVLAVPQNGLVGFALNIKKNGLTLLKVMMVMIFIAIVSFLFINSRSVWREMHLRRSLIKQKEATQEAERKNVNKSLAFASASHDVRASLAGLTGLIEMSFQEVVPGSELETNLKQMDSCAKDLLGLLNSILDTSKIEAGKMQLEEEEFDVFQLLEDVVDLYHPVAMKKGVDLVLDPCNGSLLRYSRTVGDRGKLKQVLCNLLSNAVKFTEQGHIAVRAWAQKPSLQNSIIATDNRYSLRRRLSCLFYRKNEARDDIEDMISIQQDPSCMDFTFEVDDTGIGIPKEKYKSVFENYVQVKENDFGQGGTGLGLGIVQSLVRLMHGDIGIMEKDIGEKGTCFRFNVLLNVCESGTGGGTIEGLFGSSDRNEAQGPPTISGTSICSMSPKLPICSPRPESSTAVILIQDEERRRTTQRFMESLGIQVKVVKEWRHLCHTLNKIHQQKGLYSNSPSSPGSSDLSSYDNFTGRARGVPLSPMDGIDYINSIFKKTDIEANLGFFLIVIDAHAGPFSELCRMVSEFKRGLGNAYCRVVWLEKPLMPGVNFKTLEEHVSDSNDIFLPKPLHGSRLFQVIRLLPEYGGTWQCSSSKANRERTQTSPTDEKYSSSSSWKETQQSFGYQSCDEKSPVRQGEKRECGNSSNDKPLSGMKFLVVEDNVVSRKITKAKLERLGISMEECVNGEQAVRLVGECLRRGFPNSPYHCILMDCQMPVMDGYEATRQIREMEKPYGVRIPIIALTANTGEEAKMTIEVGMDDHLVKPINEEVLLEAIGNIHRKE* 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03739 1098 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 512 668 IPR003594 -
Rops8g03739 1098 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 451 665 IPR036890 -
Rops8g03739 1098 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 384 464 IPR036097 GO:0000155|GO:0007165
Rops8g03739 1098 MobiDBLite consensus disorder prediction 907 944 - -
Rops8g03739 1098 CDD REC_hyHK_CKI1_RcsC-like 971 1091 - -
Rops8g03739 1098 SUPERFAMILY CheY-like 965 1095 IPR011006 -
Rops8g03739 1098 ProSiteProfiles Response regulatory domain profile. 970 1095 IPR001789 GO:0000160
Rops8g03739 1098 PANTHER TWO-COMPONENT HISTIDINE KINASE 91 1091 - -
Rops8g03739 1098 PRINTS Bacterial sensor protein C-terminal signature 594 608 IPR004358 GO:0016310|GO:0016772
Rops8g03739 1098 PRINTS Bacterial sensor protein C-terminal signature 628 646 IPR004358 GO:0016310|GO:0016772
Rops8g03739 1098 PRINTS Bacterial sensor protein C-terminal signature 612 622 IPR004358 GO:0016310|GO:0016772
Rops8g03739 1098 ProSiteProfiles Histidine kinase domain profile. 403 670 IPR005467 -
Rops8g03739 1098 Pfam Response regulator receiver domain 972 1091 IPR001789 GO:0000160
Rops8g03739 1098 Gene3D - 948 1097 - -
Rops8g03739 1098 SMART HisKA_10 396 462 IPR003661 GO:0000155|GO:0007165
Rops8g03739 1098 MobiDBLite consensus disorder prediction 907 962 - -
Rops8g03739 1098 Gene3D - 464 674 IPR036890 -
Rops8g03739 1098 SMART REC_2 969 1091 IPR001789 GO:0000160
Rops8g03739 1098 Gene3D - 382 463 - -
Rops8g03739 1098 SMART HKATPase_4 512 670 IPR003594 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03739 Rops-Chr8 77811422 77818077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03739 10 1084 Histidine Kinase Gene Family AT2G47430 38.158 0.0 698
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g03739 HATPase_c 8.5e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03739 - - gmx:100790376 1319.68