Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03708 ATGGCTGCAGAGGCTGCATTTTCCTTTTCAGTGGCATCGGTGGTGGAGGATGTGCTTCAACAGCACGGTCCTCGCCTCAAAGATCTTGATTTGGAATCTAGAAAAGCCGAAGAAGCTGCATCCAGAAGATATGAAGCGGCAGGGTGGCTAAGAAAAATGGTTGGAGTTGTTGCAGCTAAAGATTTACCAGCAGAGCCTTCTGAGGAGGAGTTTAGGCTTGGTTTGAGAAGTGGGATTATCCTCTGTAATGTTATTAATAAGGTTCAATCCGGTGCTGTACCAAAGGTTGTGGAGAGTCCTGTTGATTCTGCACTGATCCCTGATGGGGCACCATTATCAGCTTATCAGTATTTTGAAAACGTGAGGAATTTCCTGGTGGCTATCCAAGAAATTGGACTTCCTACCTTTGAGGCATCTGATCTGGAACAAGGAGGAAAAACATCCAGGATTGTAAACTGTGTCTTGGCCCTTAAATCCTATAGTGAATGGAAACAGAATGGGGCAAATGGTGTGTGGAAATTTGGTGGAACTCTCAAACCCAGCACTATCTCTGCAAAATCTTTTGTGAGAAAAAACTCAGAACCATTTACGAATTCCTTGTCAAGGACTTCATCAATCAATGAAAAATCTCTGACTACTCTTAACTCTGACATTGAGTCTAATAAAATGTCTGGTTCCCATTCTTTGAGTATGCTTATTCATTCAATTTTATCAGATAAGAAGCCTGAAGAAGTTCCAATGTTGGTTGAATCTGTTTTGAATAAGGTTGTAGAGGAGTTTGAGCATCGTATTGCAAGCCAAGGTGGACAGACAAAAATAACTTCAAGAGATTCTGTTTCTGAAAGCAACGGGTCTGTATCAAAGTTTGTGATGGCAGATAAGAAGGTGGAGAACAAGATTCATACAATAACAAAGAAAGAGGATTGCATTCATAAAAATCATGCTGCTGAGGAATTGCAAAGCCAACTTCTGAAACAGCAAACGCTATTTGACCAACAGCAAAGAGATATTCAAGAGCTAAAGCATACTCTTCTAACCACAAAAGCAGGCATGCAGTTCATGCAAAAGAAATTTCATGAGGAGTTTTCCAATTTTGGCATGCACGTTCATGGCTTAGCTCATGCTGCTTCTGGATATCATAGAGTTCTTGAAGAAAATCGCAAGCTATACAATGAAGTCCAGGATCTAAAGGGAAGTATTAGGGTGTACTGTCGAGTAAGACCCTTCTTTCCTGGACAACCAAACCATTTGAGTTCAGTGGAAAATATAGAAGATGGAACTATCACAGTTAATATTCCTTCAAAGAATGGGAAGGGACGCAGATCCTTCAACTTCAACAAAGTCTTTGGACCATCTGCAACCCAAGCGGAGGTCTTCTTTGATATGCAGCCACTTGTTAGATCTGTTCTTGATGGTTATAATGTTTGCATATTTGCATATGGCCAAACAGGATCAGGAAAAACTTACACCATGACCGGACCAAAAGAGATTACAGAGAAAAGCCAAGGTGTAAATTACAGGGCTCTAAGAGATTTGTTTCTTATAGCAAATCAAAGAAAAGACACTTTCCACTACGACGTTTCTGTTCAAATGATTGAGATATATAATGAGCAAGTCAGGGATCTACTGGTCACTGATGGAACAAACAGAAGATATCCTTTTACCTTTTATTTCAGTTCTCACAAAGGGCTCAGTGTGCCAGATGCAAGCATTGTCCCTGTGTCATCAACTATTGATGTTATTGAACTAATGAACCTTGGGCTAAGGAACCGCGCAGTTGGGGCAACAGCCCTTAATGACCGCAGTAGCCGATCTCATAGTTGCTTGACTGTTCATGTTCAAGGAAGAGATTTGACATCTGGAACTATCCTTCGTGGATGCATGCATTTGGTTGACTTGGCAGGAAGTGAGAGGGTAGATAAATCTGAGGCCACTGGAGATAGACTAAAAGAGGCACAACATATTAACAAATCTCTTTCAGCCTTGGGTGATGTCATCGCTTCCCTTGCTCAGAAAAACTCGCACGTTCCTTATAGAAATAGTAAACTCACACAATTGCTCCAAGATTCACTTGGAGGACAGGCTAAGACACTAATGTTTGTTCACGTAAGTCCAGAAAGTGATGCTATTGGAGAAACATTAAGTACCTTAAAATTTGCAGAAAGAGTTGCTACAGTTGAACTTGGTGCTGCTCGAGTAAACAAAGATGGTGCAGATGTTAAAGAGCTCAAAGAACAGATTGCCAGTCTTAAGGCAGCACTGGCAAGAAAGGAAGGGGAATCAGAACATTCTTTTTCTGGCAGCTCTGGAAAATACAGGACAAAGGCTAGCGAGTTGTCACCTTATCATATAAACCAGCGAGTTGCAGACACTGGGGACCAGCTTGGATGCCGGCGACCAATGGTTGAAGTTGGCAACATAGAGCTTCAAAGTAATATGACATTGAGGCACAAAACTCAGAGCTTTGATTTTGATGAGATATCATCAAATTCACCACCCTGGCCCCCAGTGAATAATCTTGGACAAAACTATGGGGAGGATGACAAAGAAACAGGTTATGGAGAGTGGGTTGATAAGGTCATGGTAAATAAACAAGATGTAAACAAAACTGAGAACCTCTTGGGCAGTTGGCAAGCAAACAACGGGAACTTATCAGAGGCCTTTTATCAGTCCTACAATATGCTCATGGGAGGTAACCAGTTTAACATTGTGGGTTCAGATGACATGGATGAGGTTGATGCTGAAACCAGTGATTCCTCAGAACCTGACTTACTTTGGCAATTTAATCATTCCAAACTAAATGGTATGACTAATGGAATGGGATCAAAGACTATGAGACCTGTCTCTAAGGCAGCAAAAAGCCCAGAATTGAGCAAGAATGTTGTTCATTCTTCTCCTGGTCCTTCTCCTTCGTTGAAACAATTGAATGGTGTCTCACATCGAACAGGAAGGCATCCGGCTTCAGTTGAAGTGAAACGTAAAACTGGGAGTAGAAAGTAA 3000 0.4147 MAAEAAFSFSVASVVEDVLQQHGPRLKDLDLESRKAEEAASRRYEAAGWLRKMVGVVAAKDLPAEPSEEEFRLGLRSGIILCNVINKVQSGAVPKVVESPVDSALIPDGAPLSAYQYFENVRNFLVAIQEIGLPTFEASDLEQGGKTSRIVNCVLALKSYSEWKQNGANGVWKFGGTLKPSTISAKSFVRKNSEPFTNSLSRTSSINEKSLTTLNSDIESNKMSGSHSLSMLIHSILSDKKPEEVPMLVESVLNKVVEEFEHRIASQGGQTKITSRDSVSESNGSVSKFVMADKKVENKIHTITKKEDCIHKNHAAEELQSQLLKQQTLFDQQQRDIQELKHTLLTTKAGMQFMQKKFHEEFSNFGMHVHGLAHAASGYHRVLEENRKLYNEVQDLKGSIRVYCRVRPFFPGQPNHLSSVENIEDGTITVNIPSKNGKGRRSFNFNKVFGPSATQAEVFFDMQPLVRSVLDGYNVCIFAYGQTGSGKTYTMTGPKEITEKSQGVNYRALRDLFLIANQRKDTFHYDVSVQMIEIYNEQVRDLLVTDGTNRRYPFTFYFSSHKGLSVPDASIVPVSSTIDVIELMNLGLRNRAVGATALNDRSSRSHSCLTVHVQGRDLTSGTILRGCMHLVDLAGSERVDKSEATGDRLKEAQHINKSLSALGDVIASLAQKNSHVPYRNSKLTQLLQDSLGGQAKTLMFVHVSPESDAIGETLSTLKFAERVATVELGAARVNKDGADVKELKEQIASLKAALARKEGESEHSFSGSSGKYRTKASELSPYHINQRVADTGDQLGCRRPMVEVGNIELQSNMTLRHKTQSFDFDEISSNSPPWPPVNNLGQNYGEDDKETGYGEWVDKVMVNKQDVNKTENLLGSWQANNGNLSEAFYQSYNMLMGGNQFNIVGSDDMDEVDAETSDSSEPDLLWQFNHSKLNGMTNGMGSKTMRPVSKAAKSPELSKNVVHSSPGPSPSLKQLNGVSHRTGRHPASVEVKRKTGSRK* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03708 999 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Rops8g03708 999 PANTHER KINESIN-LIKE PROTEIN KLP-3 47 843 IPR027640 GO:0003777|GO:0007018
Rops8g03708 999 Pfam Calponin homology (CH) domain 41 162 IPR001715 GO:0005515
Rops8g03708 999 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 399 758 IPR027417 -
Rops8g03708 999 Gene3D Kinesin motor domain 394 767 IPR036961 -
Rops8g03708 999 SMART kinesin_4 397 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 MobiDBLite consensus disorder prediction 985 999 - -
Rops8g03708 999 FunFam Kinesin-like protein KIN-14I isoform A 27 179 - -
Rops8g03708 999 CDD CH_AtKIN14-like 42 159 - -
Rops8g03708 999 PRINTS Kinesin heavy chain signature 676 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 PRINTS Kinesin heavy chain signature 596 613 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 PRINTS Kinesin heavy chain signature 472 493 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 PRINTS Kinesin heavy chain signature 627 645 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 Coils Coil 316 336 - -
Rops8g03708 999 ProSiteProfiles Kinesin motor domain profile. 399 726 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 Gene3D - 27 185 IPR036872 -
Rops8g03708 999 SMART ch_5 42 160 IPR001715 GO:0005515
Rops8g03708 999 MobiDBLite consensus disorder prediction 958 978 - -
Rops8g03708 999 SUPERFAMILY Calponin-homology domain, CH-domain 38 172 IPR036872 -
Rops8g03708 999 Coils Coil 733 760 - -
Rops8g03708 999 MobiDBLite consensus disorder prediction 937 999 - -
Rops8g03708 999 Pfam Kinesin motor domain 405 725 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g03708 999 FunFam Kinesin-like protein KIN-14I isoform A 394 768 - -
Rops8g03708 999 CDD KISc_C_terminal 397 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03708 Rops-Chr8 77438760 77445246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03708 387 726 Calmodulin-binding Proteins AT5G65930 42.899 1.05e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03708 K10406 - gmx:100795476 1650.95