Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03707 ATGTCCAGCGCCGTTGAGTCTAACGGTGCCGTTTGTTATTATTCAGTGCTTGGAATTTGCAAACATTCCACTGATGATGAAATTCGATGTGCTTATCGTAAAATGGCTCTGAAGTGGCACCCTGATCGGTGGATCAAGGATCCAAAGCTTGCATTAGAAGCCAAAAAGCGGTTTCAGCATATTCAAGAGGCTTATTCAGTTTTGTCGAATAAAGGGAAGAGAAGGATCTATGATGCTGGTTTATTTGGTCTTGTTGAAGAAGACGATGATGAGGGATTTGTTGATTTCATGCAAGAAATGGTCTTGATGATGCAGAAAGTGAGACCCAAGGATGAGAAAGGCATGTTGGAGGATCTTAAGGGATTGCTAATGGATATGATGGCTGATAGTGAACAGATGGGCAATGCTGGGTTAAGCTGGAATTCATCTAAATGTCCTACAAAAAGGACACGTATCTTATAA 462 0.4134 MSSAVESNGAVCYYSVLGICKHSTDDEIRCAYRKMALKWHPDRWIKDPKLALEAKKRFQHIQEAYSVLSNKGKRRIYDAGLFGLVEEDDDEGFVDFMQEMVLMMQKVRPKDEKGMLEDLKGLLMDMMADSEQMGNAGLSWNSSKCPTKRTRIL* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03707 153 PRINTS DnaJ domain signature 14 32 IPR001623 -
Rops8g03707 153 PRINTS DnaJ domain signature 53 73 IPR001623 -
Rops8g03707 153 PRINTS DnaJ domain signature 32 47 IPR001623 -
Rops8g03707 153 Pfam DnaJ domain 13 78 IPR001623 -
Rops8g03707 153 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Rops8g03707 153 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Rops8g03707 153 SMART dnaj_3 11 73 IPR001623 -
Rops8g03707 153 Gene3D DnaJ domain 2 97 IPR036869 -
Rops8g03707 153 SUPERFAMILY Chaperone J-domain 12 77 IPR036869 -
Rops8g03707 153 PANTHER PUTATIVE, EXPRESSED-RELATED 8 135 - -
Rops8g03707 153 CDD DnaJ 12 70 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03707 Rops-Chr8 77428735 77429761 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03707 12 79 C2H2 Transcription Factor Family AT1G74250 47.826 1.68e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03707 - - gmx:100794942 255.373