Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03695 ATGGACCCTGAAACGAGCAGAGATAGTGTCCAACAAATCGGAAAGAAAGTGCCGAATTCATCTGCCATCACTGCATGCGTTGATCCATTGGATTGGAACATACCACAATTATGCACGGATCTTGTCCAGTGTCTGTTTGTGATACACGTGAAAGCCGGGGCTTACTTTGAGAATGTGGAGGTGATAAGGAAGAAGACCAATCTAATGTTGGTGGGAGATGGAATTGGAAAGACAGTTGTGAAAGCCAGTAGAAATGTTGTGGACGGGTGGACCACTTTCCAATCAGCAACTGTCGCTGCTGCAGATTTAATCCCTGTCAAATCTTCGTTCAAGACTTACCTGGGTCGTCCTTGGAAAAAGTATTCAAGAACTGTTTATCTCAAATCTTACATGGAGGATTTGATAGACCCTGCAGGGTGGTTGGAATGGAATGGCACGTTTGCATTGGATACATTGTATTATGGTGAGTACCAGAATAAGGGTCCTGGTTCGAATACAAGTGCTAGAGTTACATGGCCAGGTTATAGGGTCATCAAGAACTCCACTGAGGCGAGCCAGTTCACAGTTGGGCAATTCATACAAGGTAATGAATGGTTGAACTCCACTGGTATTCCATTTTTCTCTGATTTGAGTTGA 636 0.4403 MDPETSRDSVQQIGKKVPNSSAITACVDPLDWNIPQLCTDLVQCLFVIHVKAGAYFENVEVIRKKTNLMLVGDGIGKTVVKASRNVVDGWTTFQSATVAAADLIPVKSSFKTYLGRPWKKYSRTVYLKSYMEDLIDPAGWLEWNGTFALDTLYYGEYQNKGPGSNTSARVTWPGYRVIKNSTEASQFTVGQFIQGNEWLNSTGIPFFSDLS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03695 211 Gene3D - 40 101 IPR012334 -
Rops8g03695 211 Gene3D - 102 210 IPR012334 -
Rops8g03695 211 Pfam Pectinesterase 99 196 IPR000070 GO:0030599|GO:0042545
Rops8g03695 211 PANTHER PECTINESTERASE 40 100 - -
Rops8g03695 211 SUPERFAMILY Pectin lyase-like 45 208 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03695 Rops-Chr8 77249575 77259429 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03695 40 99 Carbohydrate Esterase AT4G02300 55.000 2.35e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03695 K01051 - gmx:100813592 217.238