Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03683 ATGGCTGGGCCTTCTTCATCTTCTCATCGTAACAAAAGGTTCCCAATATCAGTTCCGGTGATGAATAGTGTTAAGAAGGAACATGGTTTGTTGCCTGAAGCTTTCACCAATGAGTTTGGTGAAATAATAGGTCCTTCTGCAATCATCAGTACCCCCAAAAATGGTTTTTTTGCTGTTCAATATTGCGTTGGTGTTGGAGGCAGTCTTTTCTCTAACGGATGGGGTGATTTCCTAAGGAAAAACAAACTGGACAATCATTCAAAGGTGGTTTTGATGTACATCGGTGAATCATACTTCAAGATGAACATACAAGATCAATTTGAAAATAGTCACAGATCCAACGATGCTCATTTGCATGAGATAAATCTCACTGAGTATAGCATCGACAGTCAACAGCACCTTCCCGTTTCCTTTGTTGATGCAGGTTTAAATTTAAAAAACAGTTCAATAACTATTATGGTGGAGGACGGAAGGACATGGGTTTGTGGATTGTACAGTCCTGGGAGAAACTCCAAGGAAGCTAGGATTAACAAAGGCTGGAAGCAGTTCACAACGGACATGAAGCTGAAGTCCACCAGCAAGCTCACTTTCGAAGTTCTCAATCAAAACGAAAACTTAGTTTTCGCTCGAGTGGAATACGATGAAGCATGA 651 0.4086 MAGPSSSSHRNKRFPISVPVMNSVKKEHGLLPEAFTNEFGEIIGPSAIISTPKNGFFAVQYCVGVGGSLFSNGWGDFLRKNKLDNHSKVVLMYIGESYFKMNIQDQFENSHRSNDAHLHEINLTEYSIDSQQHLPVSFVDAGLNLKNSSITIMVEDGRTWVCGLYSPGRNSKEARINKGWKQFTTDMKLKSTSKLTFEVLNQNENLVFARVEYDEA* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03683 216 Gene3D - 7 105 IPR015300 -
Rops8g03683 216 PANTHER B3 DOMAIN-CONTAINING PROTEIN REM-LIKE 3-RELATED 66 206 IPR039218 -
Rops8g03683 216 Pfam B3 DNA binding domain 131 207 IPR003340 GO:0003677
Rops8g03683 216 SUPERFAMILY DNA-binding pseudobarrel domain 21 104 IPR015300 -
Rops8g03683 216 Gene3D - 106 213 IPR015300 -
Rops8g03683 216 SUPERFAMILY DNA-binding pseudobarrel domain 121 207 IPR015300 -
Rops8g03683 216 ProSiteProfiles B3 DNA-binding domain profile. 117 214 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03683 Rops-Chr8 77086546 77087413 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Rops8g03683 B3 1.2e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03683 - - oeu:111378933 58.5362