Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03680 ATGGTATCTGCAAAAGGGAATGATTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGAACTTTGTATCCACTCACTAGCACATTTCTCTAACACTGCTGGAAGAAGCCCCAGCAAGTGGGCACGTGCGGGAGTGTCGGTGACAATAGGTGAGGTTAAGAATGTTCAATCATATCTTGCAAATTTGAAGAGGAACAAGAGTATGAAAGGAAGAAACAGAGTTGCCCTTTCAGATTGTGATGAGTGTTTTGCTGATGCCCTTGATGAGCTTCACAGATCACTTGGGGTGCTAAGAAAGCTAAGCAAAAGTACATTTAGTACCCAAATGGGGGACCTCAATACATGGATTAGTGCTGCACTTACTGATGAAGATACTTGCCTTGATGGGTTTCAAGGCAAAACTGAGACTGAGGGGCAAATCAAATTGCTGCAAAATCGGGTTCAGAATGTGTCTTACATAACCAGTAATGCTCTAGCTCTTGTCAACAAACTTGCCTCTACAGGTCTGGGAAGCATCATCACTGATCCATAA 534 0.4288 MVSAKGNDYVREACSVTRYQELCIHSLAHFSNTAGRSPSKWARAGVSVTIGEVKNVQSYLANLKRNKSMKGRNRVALSDCDECFADALDELHRSLGVLRKLSKSTFSTQMGDLNTWISAALTDEDTCLDGFQGKTETEGQIKLLQNRVQNVSYITSNALALVNKLASTGLGSIITDP* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03680 177 FunFam Pectinesterase inhibitor 3 5 166 - -
Rops8g03680 177 Pfam Plant invertase/pectin methylesterase inhibitor 9 161 IPR006501 GO:0004857
Rops8g03680 177 Gene3D Invertase/pectin methylesterase inhibitor family protein 6 167 IPR035513 -
Rops8g03680 177 NCBIfam pectinesterase inhibitor domain 4 165 IPR006501 GO:0004857
Rops8g03680 177 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 161 - -
Rops8g03680 177 SMART PMEI_2 5 161 IPR006501 GO:0004857
Rops8g03680 177 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 7 166 IPR035513 -
Rops8g03680 177 CDD PMEI-like_3 13 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03680 Rops-Chr8 77054402 77055408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03680 2 173 Carbohydrate Esterase AT3G14310 32.955 3.76e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03680 - - adu:107492431 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03680 8 77054402 77055408 Rops8g03680 8 77054402 77055408 ECH