Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03653 ATGATGAAGAGGAGAAGCCACAGGATTGAAAAGAAGGAGAGAAGGAAGTTGAAGGGGACGCTGGGTGGCAATACCACCAAGCTCTTGCAGCTTCAGCTTGGCCAAGTTTCTCTCTTTCCCCTTCACCAACACCAACCACCAACTTCTTCTACTTCTTCCGCAGTTCCTCGCTTCCAGAACCTTCTCGATGCCGCAGCACCCGATGATTCTTCTGTTCGCGTTACAGTGAAGGACGATGCTGTCACCGTGGACGACAGAGATTTCATTCTCAGCCAGGATTTCTTTTGCACTCCAGATTATATAACCCCCGATAATCAGAATATTTTGAATGGCTTGGATTTCAACAAGGAGGAAAATACCCCTTGCCCCAAATCACCAGAGAAGCTGAATACTACAAAAAGCAAGAGATGCCGACTGGATGCTATCTCAGTAAACCCTCTCAGCCCTACCTTTTCTGGTGACCATCAACAAGTTGTGGAACTTGGAAAGGATTCTGTTGCAGAGGAAGTAGCCGGTGAGAAAACAATAGCCGCTGGTAAACCAAAGGCTCAAAATTATGTGTCACAATCTGCAGTTGCATTGCGTTGCAGGGTTATGCCCCCTCCTTGCGTTAGGAACCCCTATTTGAAAGATGTTTCAGGAAAGGAGACAGATCCCTTTGGAAACCAAAGATCAAAATGTGCAGGTCTTTTCCCGGCAATTACAGGTGGTGATGGACTTTCACGCTACCGCACTGACTTTCATGAGATTGAGCAAATTGGCAGGGGGAACTTTAGCTGTGTTTTCAAAGCATTAAAGCGAATTGATGGCTGCCTGTATGCTGTGAAACACAGCACCAGACAGTTACGCCAAGAAACAGAAAGGAGGAAAGCTTTGATGGAAGTTCAAGCTTTGGCAGCCTTGGGTTTCCATGAGAACATTGTGGGGTACTATTCTTCATGGTTTGAAAATGAAAAGCTGTACATTCAGATGGAGCTATGTGATCACAGCTTATCTTTAAACAAATGCTCTACATTATTAACAGAAGGACAGGTGTTAGAAGCTTTATATCAGGTTGCAAATGCACTGCGATTTATACATGAGAAGGGGATAGCTCATCTAGATGTTAAACCTGAAAATATTTATGTCAAAAATGGTGTCTATAAACTTGGTGATTTTGGATGTGCAACTCTTCTTGATAATAGCCTGCCAATTGAGGAGGGCGACGCACGTTATATGCCCCAGGAAATCCTCAATGAGAACTACGATCACCTTGACAAGGTTGATATCTTCTCCTTGGGAGCTTCTATTTATGAACTCGTTCGGAGATTGCCTTTGCCAGACTCAGGATGTAAATTTTTACATCTTAAAGAGGGTAAATTGCCTCTCCTGCCTGGTCATTCATTGCAATTTCAAAACTTGCTTAAGGTCATGATGGACCCTGATCCGGTTAAGAGGCCTTCTGCTAGAGAGTTAGTAGAGAATCCAATTTTTGGCAAGGCCCTAAAGACAGCAAAAAATTGA 1503 0.4385 MMKRRSHRIEKKERRKLKGTLGGNTTKLLQLQLGQVSLFPLHQHQPPTSSTSSAVPRFQNLLDAAAPDDSSVRVTVKDDAVTVDDRDFILSQDFFCTPDYITPDNQNILNGLDFNKEENTPCPKSPEKLNTTKSKRCRLDAISVNPLSPTFSGDHQQVVELGKDSVAEEVAGEKTIAAGKPKAQNYVSQSAVALRCRVMPPPCVRNPYLKDVSGKETDPFGNQRSKCAGLFPAITGGDGLSRYRTDFHEIEQIGRGNFSCVFKALKRIDGCLYAVKHSTRQLRQETERRKALMEVQALAALGFHENIVGYYSSWFENEKLYIQMELCDHSLSLNKCSTLLTEGQVLEALYQVANALRFIHEKGIAHLDVKPENIYVKNGVYKLGDFGCATLLDNSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGASIYELVRRLPLPDSGCKFLHLKEGKLPLLPGHSLQFQNLLKVMMDPDPVKRPSARELVENPIFGKALKTAKN* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03653 500 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 77 494 - -
Rops8g03653 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Rops8g03653 500 FunFam WEE protein kinase 237 325 - -
Rops8g03653 500 Gene3D Phosphorylase Kinase; domain 1 238 325 - -
Rops8g03653 500 MobiDBLite consensus disorder prediction 1 21 - -
Rops8g03653 500 ProSiteProfiles Protein kinase domain profile. 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03653 500 FunFam Wee1-like protein kinase 326 495 - -
Rops8g03653 500 SMART serkin_6 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03653 500 ProSitePatterns Protein kinases ATP-binding region signature. 253 276 IPR017441 GO:0005524
Rops8g03653 500 Gene3D Transferase(Phosphotransferase) domain 1 326 496 - -
Rops8g03653 500 Pfam Protein kinase domain 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g03653 500 SUPERFAMILY Protein kinase-like (PK-like) 241 492 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03653 Rops-Chr8 76784217 76787859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03653 12 493 Core Cell Cycle Gene Families AT1G02970 60.905 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Rops8g03653 Pkinase 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03653 K06632 - gmx:547742 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03653 8 76784217 76787859 Rops8g03653 8 76784217 76787859 ECH