Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03650 ATGGAGGTCTGGAACGACGGTTTTTTGGAGCAGGAGATTGGGAGTTCCGTGGAGTCGTTTCAGAAGTTTTTGGTTTCGCAAAGAGAGCTCTTCCATGGCCAGATCGATCAGTTTCAGGAGATTGTTGTCACGCAATGCAAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCAGCTGGTGCTCTGTCAATAAAAATTGGAAAAAGACCTAGGGATTTATTGAATCCAAAGGCTGTAAATTACATGCAATCAGTTTTTTCCATTAAAGATGTAATTAGCAAGAAAGAATCTCGGGAGATCAGTGCTTTATTTGGTGTTACAGTGACACAGGTGCGTGACTTTTTCACTAGTCAACGTTCAAGAGTGAGGAGACTAGTTCAGTTGTCCAGGGAGAGGGCATTAATATCTAATTCTAGTGACGAACCTCATGATGGGCAAATAAACTCTGATCCTGCGAGACCAATAAATCTAGCTCCTTTAAACTCTGCTGGCCCCACCAATGCTGAAGAAGCATCTTGTTCAACACAGGACGCGGCTTTGTCTGACCTAGATGACTTAGATAAACAATTTGTTGAGAACATTTTTGGTCTAATGCAGAAAGAAGAGACATATTCTGGGCAGGAGAAATTGATGGAGTGGATATTGACAATACAGAATTTTTCAGTATTGTTGTGGTTTTTGACCAGAGGGGGTGCAATGATTTTAGCAACTTGGTTGAGTAATGCAGTTGTTGAAGAGCAAACAAGTGTCCTTCTTCTAATCTTGAAGGTTCTTTGTCATTTGCCTTTACATAAAGCCCTTCCTACACACATATCAGCTTTATTGCAAAGTGTTAATAGACTACGGTTCTACAGGACATCAGACATATCAAACAGGGCAAGGGTTTTGTTATCAAAGTGGAGCAAATTATTAGCAAGGAACAATGCAATAAAGAAACCCAATGGTGTTAAACCTTCTGGTGATGGTCAAAAAGAGATAACGCTTTCTCAGAGCATTGATCAAATTGTGGGCTCTGAATCATGGCATTCAAATATTGACATTCCTGAACACATTTTTGCTCTCTCAAATGAATGTTCGGATAATTTCAGGAAGCTGGAATCTTCTCAAACTGTGAAATTGTTGCCACCCAGCTCAGATGATTCTAATAAGAAACCCACCCTTGGTGTATCTTCATCTCAAGCTAGAGAGCGCAGAAAAGTGCAATTGGTGGAACAGCCAGGCCAGAAATCAGTGAGCAGAAACCCACAAGTGGCAAGAGCAGGGCCTGTAAGTCAAAGTCGTCCCATGTCCGCTGATGATATCCAGAAAGCAAAAATGCGAGCATTGTTTATGCAGAGTAAGTATGGGAAAAATGGTTCTTCAAAAGAAAGTAAAGAAGCAAAAATGGACGGACTGAATAAACCTCAGACAAATCAGGCCAGTATTGCAGTTTGCTCTTCTAAAGTTCCTATTCCACCCAAAATTGAAGAAGACAAGAAACTTCTGTTGCTTGCCTCTAAAACCAATAATAGGCTGGACGCTTCTTATTCTAAACTGAAAATGGATTTGAAGGAACCTCTCTGGGAAAAGTGCAAAAGGGTGCAAATCCCATGGAAAACACCGGCAGAAGTGAAACTTAGAGATGCATGGAGGGTTGGTGCCGGTGAAAATAGCAAAGAGGTTGATGTCCAGAAAAACAGAAACCGCAGGGAAAAGGAAACTAATTATCAGACTGTCCAAGAGATACCACCTAATGCCAAGGAACCGTGGGACCTCGAAATGGACTATGATGACACTTTGACACCGGAAATTCCTATTGAACAGCTACCAGACAGTGATGGTGCAGAAATAGTAGCTGCCCCCAATCAGGTTGCAACTCATGCTGTTCAAGGGGTGGCCTCCACATCTGCAACCAGTAATGCAACTGCTGAACCTGATTTAGAATTGCTTGCCGTACTACTAAAAAATCCAGAGTTGGTATTTGCCTTAACTTCTGGACAAGCTGGCAGCATGCCAAATGAGGAAACCATGAAGCTGCTTGACATGATCAAGAGAGGTGGTGTGAACTTGGGTGTAAGTGGAAATACAAATGGCAATTATGGCACGAGTGTAAAGGCCCCCGAGAATGTGGAAGTTTCTCTCCCATCTCCAACTCCTTCAAGCGATCCAAGAACGAGTGGATGGAGCACAGAAGCATCAAAGAATCCTTTTACACGTCGAAGTTTAGCTCCTGATAGAATTATGCAGAACTCTGCTGCAGCATCAACCACCAACTTATTGTCTCAGGTTCCAGTAACTAGCAATACAGTAAGGCAACAGCCAACAGTTATGGTTCCATCTTCGAAGCACCTCACCAGCACAGCTGTCTCTCCATACTCACTGCCTCATACAACTAATATTATTCCTGAAAAGCAACCACCATCTCTTTCCTCTCTGCATGTACAAACACCATCCTCAGATATAGGTTTAACCATGAGAAACGTAATCACTGCAAATGCATCTTCAGTCAACTTACCTGGCACACATTCACATCTACCAATGCGGGCTGGTGGCACAAATAATGTAAAACCAATACCCAATTTGAGCGTACAAGAGGGTTTGTCTAATTCATTCCAACAATCCATGTTGACCTCACCAACCCCATCACACTCAGCTACACAACAACAAAGACATCCACATTTGCTCCATCAAGCCCATTTCACCGAACCTTCCTATCGTAACCCTGTCCATTCCTATCCCCCACCAATAGAAAAATCAGGTCCTGTGTCAGATTTGTGGAGAGTTGGGCAGGATACATCATCCAGTTATCATTCTCAACGAAATCATAACAACTATAACTCAATAGTAGGGAGATCCATGCAATCTGGTTCTTGGGATAGAAATAATCATGGAAGGGAAGAATTTGAATCATGGAGTCCGGAGAATAGTCCAACTAGGAATCCTAGGTATGTTGGTAGAAATTTCCCAGAGTCCAGAATGAATCATGCAAGAAATCATAGACCTGAATCGTCAAGGCAGCGGAGTTCTTCCGGACACTGGGACCCTGGTAGGCACGGGAACAAAAGGTGGCATGATCAGAGACGATGA 3069 0.4282 MEVWNDGFLEQEIGSSVESFQKFLVSQRELFHGQIDQFQEIVVTQCKLTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDVISKKESREISALFGVTVTQVRDFFTSQRSRVRRLVQLSRERALISNSSDEPHDGQINSDPARPINLAPLNSAGPTNAEEASCSTQDAALSDLDDLDKQFVENIFGLMQKEETYSGQEKLMEWILTIQNFSVLLWFLTRGGAMILATWLSNAVVEEQTSVLLLILKVLCHLPLHKALPTHISALLQSVNRLRFYRTSDISNRARVLLSKWSKLLARNNAIKKPNGVKPSGDGQKEITLSQSIDQIVGSESWHSNIDIPEHIFALSNECSDNFRKLESSQTVKLLPPSSDDSNKKPTLGVSSSQARERRKVQLVEQPGQKSVSRNPQVARAGPVSQSRPMSADDIQKAKMRALFMQSKYGKNGSSKESKEAKMDGLNKPQTNQASIAVCSSKVPIPPKIEEDKKLLLLASKTNNRLDASYSKLKMDLKEPLWEKCKRVQIPWKTPAEVKLRDAWRVGAGENSKEVDVQKNRNRREKETNYQTVQEIPPNAKEPWDLEMDYDDTLTPEIPIEQLPDSDGAEIVAAPNQVATHAVQGVASTSATSNATAEPDLELLAVLLKNPELVFALTSGQAGSMPNEETMKLLDMIKRGGVNLGVSGNTNGNYGTSVKAPENVEVSLPSPTPSSDPRTSGWSTEASKNPFTRRSLAPDRIMQNSAAASTTNLLSQVPVTSNTVRQQPTVMVPSSKHLTSTAVSPYSLPHTTNIIPEKQPPSLSSLHVQTPSSDIGLTMRNVITANASSVNLPGTHSHLPMRAGGTNNVKPIPNLSVQEGLSNSFQQSMLTSPTPSHSATQQQRHPHLLHQAHFTEPSYRNPVHSYPPPIEKSGPVSDLWRVGQDTSSSYHSQRNHNNYNSIVGRSMQSGSWDRNNHGREEFESWSPENSPTRNPRYVGRNFPESRMNHARNHRPESSRQRSSSGHWDPGRHGNKRWHDQRR* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03650 1022 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 106 1005 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 692 735 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 369 431 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 986 1015 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 920 953 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 551 570 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 406 431 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 707 731 - -
Rops8g03650 1022 Gene3D - 68 125 - -
Rops8g03650 1022 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Rops8g03650 1022 MobiDBLite consensus disorder prediction 138 170 - -
Rops8g03650 1022 SUPERFAMILY Homeodomain-like 69 130 IPR009057 -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 867 886 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 369 397 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 551 571 - -
Rops8g03650 1022 MobiDBLite consensus disorder prediction 898 1022 - -
Rops8g03650 1022 SMART HOX_1 68 130 IPR001356 GO:0003677
Rops8g03650 1022 MobiDBLite consensus disorder prediction 447 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03650 Rops-Chr8 76727599 76736983 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03650 521 734 Homeobox Transcription Factor Family AT4G02560 50.467 3.82e-49 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03650 - - gmx:100806633 1572.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03650 8 76727599 76736983 Rops8g03650 8 76727599 76736983 ECH