Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03615 ATGCCGGCTGGTCATGGTTTGAGAGCTCGCACCAGAGACTCCTTCTCTCGTCCTTTCAGGAAGAAGGGTACTATTGCTCTCACCACATACCTCAGGACCTATCATATCGGTGACTATGTTGACATCAGGGTTAACGGCGCCGTCCACAAAGGTATGCCTCACAAGTTCTACCATGGTCGCACCGGTCGTGTCTGGAACGTTACCAAACGTGCCATTGGCGTCGAGGTCAACAAACAGGTGGGGAACAGGATAATTAGAAAGAGGATCCATGTTCGTGTGGAGCATGTGATGCCTTCAAGGTGCACTGAGGAGTTCCGTTTGAGGAAGATCAAGAATGATAAGCTCAAGGCTGAGGCTAAGGCTAAGGGTGAGGTTATCAGTACCAAGAGACAACCTCAAGGTCCTAAACCTGGTTTCATGGTTGAAGGTGCTACATTGGAGACTGTAACACCTATTCCATATGATGTCGTCAATGATCTTAAGGGCGGTTACTAG 495 0.4889 MPAGHGLRARTRDSFSRPFRKKGTIALTTYLRTYHIGDYVDIRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDKLKAEAKAKGEVISTKRQPQGPKPGFMVEGATLETVTPIPYDVVNDLKGGY* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03615 164 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Rops8g03615 164 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Rops8g03615 164 FunFam 60S ribosomal protein L21 99 158 - -
Rops8g03615 164 FunFam 60S ribosomal protein L21 1 98 - -
Rops8g03615 164 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Rops8g03615 164 Gene3D - 99 156 - -
Rops8g03615 164 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Rops8g03615 164 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03615 1 164 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 84.146 6.95e-105 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03615 K02889 - gmx:100305629 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03615 8 76246302 76247304 Rops8g03615 8 76246302 76247304 ECH