Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03585 ATGGGTTCCCTTCCCCAAGTAGTAGAGGACTGCATGGGCTTCCTCCAACTCTATAGCGATGGCTCCATTTTCCGCTCCAACGACATCAAATTCCAAGTTTCCGCCATCGATGACCAAACCCTAACCTTCAAGGACTGTCTCTTTGACAAAAGATTCAACCTCTTTCTTCGAATCTACAAACCCAAACACTCAACAACACCCAACAACAAAAACAAAAAAATCCCTGTGGTGATGTTCCTTCACGGTGGAGGCTTTTGTTTTGGCTCACGCAAGTGGCCCCATTTTCACAACTGTTGCATGCGCCTCGCTTCAGGCCTCCAAGCGCTGGTGGTTTCCCCCGATTACCGCCTCGCACCGGAGCACCGTCTTCCGGCGGCAGTGGACGACGCCGTGGAGGCGCTGAGGTGGCTACAGAGGCAGGCGTTGAGTTTGAACCAAGACGGTGTTGATAACAATGGTGGGGACGCATGGTTGAATGGTGATGTTGACTTTGACCGTGTGTTCATTGTGGGTGACTCATCTGGGGGGAACATTGCGCACCACCTCGCCGTTCGGTTCGGTTCCGGTTCCACCGATTTAGACCCGGTTCGAATACGAGGTTACGTGTTGTTGGCGCCCTTTTTCGGTGGAGAGGTTCGAACCAAATCCGAGGAAGGTCCTCCTGAACGAACATTGAACCTTGACTTACTAGACAGATTTTGGAGGCTGTCAATGCCTGTTGGAGAGAACAGAGACCACCCATTGGCGAATCCATTTGGACCTAACAGTCCAAATCTTGGACAACTGAAGCTTGAGCCTATTTTGGTGATAGTGGGTGGCAATGAATTGCTTAAGGATAGGGCAGCAGATTATGCAACAAGGTTAAAAAAATTAGGGAAGGACATTAAATACGTTGAGTTTGAGGGAAGAGAACATGGATTTTTCACGCATGATTCATACTCAGAAGTTTCAGAAGAGGTCATCCAAATCATTAAAAGATTCATGCTTGAAACTTCTAGTTAG 1002 0.485 MGSLPQVVEDCMGFLQLYSDGSIFRSNDIKFQVSAIDDQTLTFKDCLFDKRFNLFLRIYKPKHSTTPNNKNKKIPVVMFLHGGGFCFGSRKWPHFHNCCMRLASGLQALVVSPDYRLAPEHRLPAAVDDAVEALRWLQRQALSLNQDGVDNNGGDAWLNGDVDFDRVFIVGDSSGGNIAHHLAVRFGSGSTDLDPVRIRGYVLLAPFFGGEVRTKSEEGPPERTLNLDLLDRFWRLSMPVGENRDHPLANPFGPNSPNLGQLKLEPILVIVGGNELLKDRAADYATRLKKLGKDIKYVEFEGREHGFFTHDSYSEVSEEVIQIIKRFMLETSS* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03585 333 Pfam alpha/beta hydrolase fold 77 308 IPR013094 GO:0016787
Rops8g03585 333 SUPERFAMILY alpha/beta-Hydrolases 5 328 IPR029058 -
Rops8g03585 333 Gene3D alpha/beta hydrolase 16 329 IPR029058 -
Rops8g03585 333 PANTHER ARYLACETAMIDE DEACETYLASE 11 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03585 Rops-Chr8 75974921 75978677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03585 7 327 Carbohydrate Esterase AT5G16080 31.595 2.55e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03585 - - gmx:100803077 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03585 8 75974921 75978677 Rops8g03585 8 75974921 75978677 ECH
Rops8g03585 8 75974921 75978677 Rops6g00744 6 19137307 19144478 PCT