Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03581 ATGGTATGCAAAATTCCAAATCTCGAGCTTCCCTCTTGTGCCGCTTTGGTCATTATTCCTTTTGAGAAAAACGAGGGGATGGAGAATACAAGTACAAGTGGATTGGTGAGAACGAAATCGGATCAGCTAGTGGAGTCGGTGGTGGCAGCTATGAAGTCACCAGTGGTGGAGGGAAGTGGTGGGACCCCGTCGAGGAAATCAAGTCGGAGGATGTCACCTAGTGGAGGCAAAAACACGCACATCAGGAAGGCTAGGAGTGCCCAGATGAAGGTTGAGATGGATGAGGTTAGTAGTGGAGCAGCTCTTAGCCGAGCTTCCAGTGCCAGCTTGGGCCTCTCATTCTCCTTCACTGGTTTCAGTATTCCTCCTGATGAAATTGCTGATTCCAAGCCATTTAGCGACGATGATATCCCTGAGGATATTGAAGCTGGAACTCATAAGCCAAAGTTTCAAACGGAACCAACTCTGCCAATATATCTGAAGTTCACTGATGTGACTTACAAGGTAGTGATCAAAGGCATGACGACAACTGAGGAGAAGGAGATCTTGAGGGGGATCACTGGTTCTGTAAATCCAGGGGAAGTTTTGGCATTGATGGGTCCCTCAGGAAGTGGAAAAACATCTTTGTTAAATTTGCTTGGAGCAAGGTTAAGGCAACCCACAATTGGTGGCTCTATCACTTATAATGACAAACCATATTCCAAGTTCTTAAAGAGCAGGATTGGTTTCGTGACACAAGATGATGTTCTGTTTCCTCACCTAACGGTGAAAGAAACATTGACTTATGCAGCCCGCTTAAAGTTGCCAAATACATTAACCAAAGAGCAAAAGGAAAAACGAGCCTTAGATGTCATCATCGAGCTGGGCTTGGAGAGGTGCCAAGACACTATGATAGGAGGGTCCTTTGTTCGAGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATTGGGAGTGAGATCATAATCAATCCTTCTCTTCTGCTTCTTGATGAACCAACTTCTGGTTTGGATTCTACAACAGCCTCGAGAATAGTTCAGATGTTACATGACATAGCAGAGGCTGGTAAAACTGTAGTGACAACAATCCATCAACCATCAAGCAGACTCTTTCATAAATTTGATAAGTTGATCCTTCTAGGAAAAGGGAGCTTGCTTTACTATGGAAAAGCATCTGAAGCAATGAACTACTTCCAATTTATAGGGTGTACTCCTCTTATTGCCATGAACCCAGCAGAGTTTTTATTAGACCTTGCAAATGGAAACATAAATGATATTTCAGTACCATCAGAGTTACAGGATAGAGTGCATATGGGAAATGCAGAAGCTGAAACACGAAATGGGAAACCATCAGCCACAGTTATACAAGAGTATCTGGTGGAGGCATATGAGACTAAAGTTGCAGAAACTGAGAAGAAAAAGCTAATGGTTCCCATCCCCCTTGATGAAGAAGTGAAGTCTAAGGTTTGTTCTCGTAAGAGACAGTGGGGAGCAAGTTGGTTTGAGCAATATTTCATATTATTTTCAAGAGGATTCAAACAACGGAGGCATGACTATTTCAGCTGGTTGAGAATCACTCAAGTTTTATCCACTGCAGTCATCTTAGGATTACTCTGGTGGCAATCAGATGCTAAAAATCCAAATGGTTTGCAAGACCAGGCAGGACTGCTTTTCTTTATTGCTGTCTTTTGGGGATTCTTTCCTGTCTTCACTGCAATATTCACATTTCCTCAAGAGAGAGCCATGCTGACTAAGGAAAGAGCAACAGATATGTACAGACTAAGTGCATACTTTGTGGCTAGAACTACAAGTGACCTTCCACTAGACCTTGTATTACCCGTTCTTTTCCTCCTTGTTGTTTATTTCATGGCCGGTTTGAGACTGAGTGCACAGCCGTTTTTCCTTAGTATTCTTACAGTTTTTCTCTGCATTGTGGCAGCTCAGGGTCTTGGACTTGCTATTGGGGCTACACTAATGGACTTGAAAAAGGCAACTACTTTGGCTTCAGTGACAGTGATGACTTTCATGCTGGCTGGAGGTTTCTTTGTGAAGAAAGTTCCCATATTTATATCTTGGATTCGCTACCTATCTTTCAACTACCACACGTACAAACTTTTGCTGAAGGTGCAATATGAACATAGCAGACCCAGAAGCATAAATGGGATCAAAATTGACAATGGTTTCACCGAGGTTGCTTCTCTGATAGCCATGGTTTTTGGTTACCGTTTATTGGCATATCTTTCTTTGCGTCGGATGAAACTTCAAGCATAG 2268 0.429 MVCKIPNLELPSCAALVIIPFEKNEGMENTSTSGLVRTKSDQLVESVVAAMKSPVVEGSGGTPSRKSSRRMSPSGGKNTHIRKARSAQMKVEMDEVSSGAALSRASSASLGLSFSFTGFSIPPDEIADSKPFSDDDIPEDIEAGTHKPKFQTEPTLPIYLKFTDVTYKVVIKGMTTTEEKEILRGITGSVNPGEVLALMGPSGSGKTSLLNLLGARLRQPTIGGSITYNDKPYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLKLPNTLTKEQKEKRALDVIIELGLERCQDTMIGGSFVRGVSGGERKRVCIGSEIIINPSLLLLDEPTSGLDSTTASRIVQMLHDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYYGKASEAMNYFQFIGCTPLIAMNPAEFLLDLANGNINDISVPSELQDRVHMGNAEAETRNGKPSATVIQEYLVEAYETKVAETEKKKLMVPIPLDEEVKSKVCSRKRQWGASWFEQYFILFSRGFKQRRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPNGLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLTKERATDMYRLSAYFVARTTSDLPLDLVLPVLFLLVVYFMAGLRLSAQPFFLSILTVFLCIVAAQGLGLAIGATLMDLKKATTLASVTVMTFMLAGGFFVKKVPIFISWIRYLSFNYHTYKLLLKVQYEHSRPRSINGIKIDNGFTEVASLIAMVFGYRLLAYLSLRRMKLQA* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03581 755 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 113 745 - -
Rops8g03581 755 Pfam ABC-2 type transporter 363 423 IPR043926 GO:0140359
Rops8g03581 755 Gene3D - 159 400 IPR027417 -
Rops8g03581 755 MobiDBLite consensus disorder prediction 51 90 - -
Rops8g03581 755 FunFam ABC transporter G family member 22 170 400 - -
Rops8g03581 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 400 IPR027417 -
Rops8g03581 755 CDD ABCG_EPDR 157 388 - -
Rops8g03581 755 SMART AAA_5 192 383 IPR003593 GO:0016887
Rops8g03581 755 Pfam ABC-2 type transporter 501 710 IPR013525 GO:0016020|GO:0140359
Rops8g03581 755 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 406 IPR003439 GO:0005524
Rops8g03581 755 ProSitePatterns ABC transporters family signature. 306 320 IPR017871 GO:0005524|GO:0016887
Rops8g03581 755 MobiDBLite consensus disorder prediction 60 81 - -
Rops8g03581 755 Pfam ABC transporter 183 334 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03581 Rops-Chr8 75899234 75907369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03581 181 420 Calmodulin-binding Proteins AT2G36910 29.719 1.26e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03581 K05681 - gmx:100796008 1191.41