LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops8g03545	ATGGCTGATAAGCAACCCCAGTTGAACGGCGCCTACTATGGACCCGCCATTCCGCCAGCTGAGCAACCCCGCAACCACCATCACCGCGGCAGAAGCTGCTGCTGCTGCCTCTTCGGCTGCATCTGGAAGATTCTGCTTACACTCATTGTCATCGTAGGCCTCGCAATCCTCATCTTCTGGCTTATAGTTCAACCTCGCTCATTCAAGTTCTATGTTTCTGAAGCCAAGTTAACCAAATTCGACTACACCAACAACACCCTCCATTACGACATGGTGCTAAACTTCACTGCTCGCAACCCCAACAAAAAACTCAGCATCTACTACGACAAAGTGGAGGCATTAGCATTCTACGAGGATGCAAGATTCGCTAAAGCCGATGTGATAACGCACATGAACTCGTTCCGCCAATACAAGAAGAGCACTAACCCCATGAGCGTTGATTTCAAGGGGCAGCAACTGTTATTGCTTGACAATGATCAGGTTTCTGAATTTAACAAAGACAAGAGTGCTGGGGTTTATGACATCTATGTGAAGCTCTACTTCAGGATTAGGTTCAGGCTTGGGGACGTGATATCCGGTGACTACAAGCCCAAGGTCAAATGTGACATCAAGGTTCCATTTAGTTCTAACGATACCAGCACAACCCCGATTCGGTTTGAGTCCACTAAGTGCGATGTTGATTTCTAG	687	0.476	MADKQPQLNGAYYGPAIPPAEQPRNHHHRGRSCCCCLFGCIWKILLTLIVIVGLAILIFWLIVQPRSFKFYVSEAKLTKFDYTNNTLHYDMVLNFTARNPNKKLSIYYDKVEALAFYEDARFAKADVITHMNSFRQYKKSTNPMSVDFKGQQLLLLDNDQVSEFNKDKSAGVYDIYVKLYFRIRFRLGDVISGDYKPKVKCDIKVPFSSNDTSTTPIRFESTKCDVDF*	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops8g03545	228	PANTHER	OS05G0367900 PROTEIN	39	220	IPR044839	GO:0098542
	Rops8g03545	228	Pfam	Late embryogenesis abundant protein	95	200	IPR004864	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops8g03545	Rops-Chr8	75299106	75300038	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops8g03545	62	215	SNARE and Associated Proteins	AT1G32270	32.903	5.38e-21	87.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops8g03545	-		-	gmx:100795302	379.022