Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03544 ATGGTGCCTTCTACGGCCCCGCCATTCCGCCACCGCCACCAACGTGGCAGAAGCTGTTGCTGCTGCCTCTTTGGTTGCCTCTGGAAGATTCTGCTTACACTCGTTGTCATCGTAGGCCTCGCAATCCTTATCTTCTGGCTGATCGTTCAACCTCGCTCATTCAAGTTCTATGTCACTGGAGGCAAGCTTACCAAATTAGACTACACCAACAACACCCTCCACTACGACATGGTGCTAAACTTCACTGCTCGCAACCCCAACAAAAAGCTGAGCATCTACTATGACAAAGTGAAGGCATTGGCATTCTACGAGGGTGCAAGGTTCGCTAAAGCCGATGTGATAACGCACATGAACTCATTCCGCCAGTACAAGAAGAGCACTGACCCCATGAGTGGTGTTTTCAAGGGCCAGCAACTGTTGATGCTCGACAATGATCAGGTTTCTGAGTTTAACATAGACAAGAGTGCTGGGGTTTATGATATCTATGTGAAGCTGTACTTCAGGATTAGGTTCAGGCTTGGGGACTCGATATCCAGTGACCGCAAACCCAAGGTCAAATGTGACATCAAGGTTCCCTTATCTTCTAACAATGCCACCACAACCCTGATCTGGTTTGAGTCTACTAAGTGCGATGTTTATTTCTAG 645 0.4806 MVPSTAPPFRHRHQRGRSCCCCLFGCLWKILLTLVVIVGLAILIFWLIVQPRSFKFYVTGGKLTKLDYTNNTLHYDMVLNFTARNPNKKLSIYYDKVKALAFYEGARFAKADVITHMNSFRQYKKSTDPMSGVFKGQQLLMLDNDQVSEFNIDKSAGVYDIYVKLYFRIRFRLGDSISSDRKPKVKCDIKVPLSSNNATTTLIWFESTKCDVYF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03544 214 Pfam Late embryogenesis abundant protein 81 185 IPR004864 -
Rops8g03544 214 PANTHER OS05G0367900 PROTEIN 19 196 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03544 Rops-Chr8 75279583 75280227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03544 48 201 SNARE and Associated Proteins AT1G32270 30.968 1.64e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03544 - - gmx:100795302 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03544 8 75279583 75280227 Rops6g00805 6 20661882 20662838 PCT