Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03543 ATGTCTCAGTTGAACGGAGCCTACTATGGCCCTGCCATCCCGCCGGCAAAATCCTACCACAGGCCATCGCGTGGCGGCGGCTTCGGCTGCTGCTGCGGCTGCCTCTTCAGCCTCGTCTTCAAAATAATCCTCACCATCATCATCATCGTCGGCATCGCTGTCTTCCTCTTCTGGCTCATCGTACGCCCCAACGTTGTTAAGTTTCATGTCACCGATGCCACCCTAACACAATTCAACTACACTGGCAACACCCTCCACTACGACCTTGCTCTCAACATCACTGTCCGCAACCCCAACAAGAGGCTTGGCATCTACTACGACTACATCGAAGCCAGAGCACTGTACGAGGATGTCAGGTTCGACTCCGATTTCGTGGACCCTTTCTATCAGGGGCATAAAACCACCAACGTGATAAACCCTGTGTTCAAGGGTCAACAGGTGATGGCGCTTGATGCTGAACAAACTTCGGAACTTAACAAGGAGAAAAGCGAGGGGGTTTATGAGATTGATGTGAAGGTGTATCTGAGGGTGAGGTTCAAGTTGGGAGTGTTCAAAACCAAGACGCTGAAGCCTAAGGTTACGTGTGACTTGAAAGTTCCTTTGGCTCCGGCTGGTGGCTTTGAAACCACCAAGTGCGATTGGGATCACTGA 651 0.5161 MSQLNGAYYGPAIPPAKSYHRPSRGGGFGCCCGCLFSLVFKIILTIIIIVGIAVFLFWLIVRPNVVKFHVTDATLTQFNYTGNTLHYDLALNITVRNPNKRLGIYYDYIEARALYEDVRFDSDFVDPFYQGHKTTNVINPVFKGQQVMALDAEQTSELNKEKSEGVYEIDVKVYLRVRFKLGVFKTKTLKPKVTCDLKVPLAPAGGFETTKCDWDH* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03543 216 Pfam Late embryogenesis abundant protein 92 195 IPR004864 -
Rops8g03543 216 PANTHER OS05G0367900 PROTEIN 30 200 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03543 Rops-Chr8 75271377 75272353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g03543 60 209 SNARE and Associated Proteins AT1G32270 37.086 9.73e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03543 - - gmx:100793187 352.443