Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03536 ATGTCTAGCTCCAGGAAGAAGCTTGTTTTGAACAATGTGTCTGTGAAACTAGGCTGCGGCAGCTGCAGAAGATTAAAGCTGGGTCGCATATTCAACCCAAAGCCAAAACCAAAGAACCCCACTTACCAAAAACACAAACTTTACAACCATTCTCTTTCAGGCACTTGGGGTGAGGACAAATATGACAGTACCAGCACCACCACAAATACCACCCCCACCAACACTGCCACCACATTCTCATTCTCTCCCTGCTACGTTGATTCTTCACAGTTTTCTGATTCAGAGACCTACGTGAAGGCTCCAAGGACAGTAGGAGGTTTTGGCAGAGCTGGCAGAGAAGGTGTGGCTGTGGAGAAAGACTCTGATGACCCTTATCTGGATTTCAGGCGTTCAATGCTTCAAATGATTTTGGAAAATGAGATATACTCCAAGGATGATCTCAGGGAGCTTCTGAACTGTTTTCTTCAACTGAATTCACCTTATCACCATGGGGCCATAGTTAGAGCTTTCACTGAGATCTGGAATGGGGCCTTCTCTGTGAGGTCCAATTCACCCAGGTTTCATATCCCCCGTTAA 576 0.4601 MSSSRKKLVLNNVSVKLGCGSCRRLKLGRIFNPKPKPKNPTYQKHKLYNHSLSGTWGEDKYDSTSTTTNTTPTNTATTFSFSPCYVDSSQFSDSETYVKAPRTVGGFGRAGREGVAVEKDSDDPYLDFRRSMLQMILENEIYSKDDLRELLNCFLQLNSPYHHGAIVRAFTEIWNGAFSVRSNSPRFHIPR* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03536 191 Pfam Transcriptional repressor, ovate 121 175 IPR006458 -
Rops8g03536 191 ProSiteProfiles OVATE domain profile. 117 176 IPR006458 -
Rops8g03536 191 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 53 178 IPR038933 GO:0045892
Rops8g03536 191 NCBIfam uncharacterized plant-specific domain TIGR01568 115 174 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03536 Rops-Chr8 75142848 75143677 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops8g03536 Ovate 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03536 - - mtr:25499452 273.863