Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g03535 ATGAAGAAACTCCCTTCTCTTCTTAAGAACTCAGAAGTTAAGTCTTCTTCTTCTTCATCATCATCATGGCCATGGCCATCTTGTCACCGACCCAGAACACTCTCTTTCAGAGCTAATGACAACGACACATTCAAAACTATCAACTCAGCTTACTTGGATGCCACCATGGATATGCTAGAAAGCTCTGAATCCTTTTTCACTGTTTCTCCTGAGTCTGCTAGCTTCTCAACTGCATCTGAAGAGTCCAGAAGAGGGGATTCAATTGAAACTGTGATTCGTGGGTTGCGTTCTGACCGTTTGTTCTTCGAGCCAGATGAGACCAGCTCCATATTAGAGGCTAAAGCAGGAACCTTGCCATTCAAAGATAGCGTGGCGTTATCCATGGAATCTCAAGATCCTTGTGTTGATTTTCGAAAGTCCATGGAGGAGATGGTAGAGGCTCATTGTGTTAAGGACTGGGAGGGTCTTCAAGAGCTTTTGTGTTGGTATTTGAGGGTCAATGAAAAAAGCAATCATGGTTATATTGTTGGTGCTTTTGTTGATTTATTGGTCGGTGTTGCATTTGCTTCTGGGTCATTTTCTTCTTCTTCTTCTCATTCTCATTCTCCTTCTTCTCCTTTATCGTTTTATAGTTCTTCTGTGTCTTCTTCTTGCAGCACCCGTTGTGTTTCTTGTTTGGAAGCTGAGGAGGAGGTTGATACTCCTAGTTCATCTTTGTTGTTAGAACAAGTTAGGGAGGAGATTAATTCTGAAGTTGAGGCTTCTTCATCTTCATCTTCAAATATTTGA 789 0.417 MKKLPSLLKNSEVKSSSSSSSSWPWPSCHRPRTLSFRANDNDTFKTINSAYLDATMDMLESSESFFTVSPESASFSTASEESRRGDSIETVIRGLRSDRLFFEPDETSSILEAKAGTLPFKDSVALSMESQDPCVDFRKSMEEMVEAHCVKDWEGLQELLCWYLRVNEKSNHGYIVGAFVDLLVGVAFASGSFSSSSSHSHSPSSPLSFYSSSVSSSCSTRCVSCLEAEEEVDTPSSSLLLEQVREEINSEVEASSSSSSNI* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g03535 262 MobiDBLite consensus disorder prediction 9 28 - -
Rops8g03535 262 MobiDBLite consensus disorder prediction 1 28 - -
Rops8g03535 262 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 31 187 IPR038933 GO:0045892
Rops8g03535 262 NCBIfam uncharacterized plant-specific domain TIGR01568 124 185 IPR006458 -
Rops8g03535 262 ProSiteProfiles OVATE domain profile. 126 185 IPR006458 -
Rops8g03535 262 Pfam Transcriptional repressor, ovate 130 185 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g03535 Rops-Chr8 75126885 75127673 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops8g03535 Ovate 4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g03535 - - lang:109348301 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g03535 8 75126885 75127673 Rops6g03350 6 57975864 57976874 ECH
Rops8g03535 8 75126885 75127673 Rops8g03535 8 75126885 75127673 ECH